RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 FGL1Q08830 312 aa17.18■□□□□ 0.34
ATXN3-253ENST00000621269 C17orf77Q96MU5 243 aa17.18■□□□□ 0.34
ATXN3-253ENST00000621269 SCRT1Q9BWW7 348 aa17.18■□□□□ 0.34
ATXN3-253ENST00000621269 SLC25A39Q9BZJ4 359 aaPredicted RBP17.18■□□□□ 0.34
ATXN3-253ENST00000621269 HIGD1AQ9Y241 93 aa17.18■□□□□ 0.34
ATXN3-253ENST00000621269 P0DMU3 169 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 FAM231AP0DMU4 169 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 FAM231CP0DMU5 169 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 RRAS2P62070 204 aaPredicted RBP17.17■□□□□ 0.34
ATXN3-253ENST00000621269 SELENOTP62341 195 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 IAH1Q2TAA2 248 aaPredicted RBP17.17■□□□□ 0.34
ATXN3-253ENST00000621269 S100A7AQ86SG5 101 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 C1orf158Q8N1D5 194 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 TMEM208Q9BTX3 173 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 DKK2Q9UBU2 259 aa17.17■□□□□ 0.34
ATXN3-253ENST00000621269 PMS2P5A8MQ11 134 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 H3BRN7 92 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 DUSP14O95147 198 aaKnown RBP17.16■□□□□ 0.34
ATXN3-253ENST00000621269 OR5G3P0C626 314 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 DLK1P80370 383 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 CNPY1Q3B7I2 92 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 FAM222AQ5U5X8 452 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 SDHCQ99643 169 aaPredicted RBP17.16■□□□□ 0.34
ATXN3-253ENST00000621269 NIPSNAP3BQ9BS92 247 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 SHANK2-AS3Q9BTD1 123 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 NPVFQ9HCQ7 196 aa17.16■□□□□ 0.34
ATXN3-253ENST00000621269 LOC102723971A0A1B0GUV8 181 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 METTL15P1P0C7V9 234 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 LINC00869P0C866 280 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 RPL7P18124 248 aaKnown RBP17.15■□□□□ 0.34
ATXN3-253ENST00000621269 BTCP35070 178 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 RRN3P1Q2M238 152 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 IGFL4Q6B9Z1 124 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 OR10P1Q8NGE3 313 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 IGF2BP2-AS1Q96M15 143 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 GSKIPQ9P0R6 139 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 MGAT4CQ9UBM8 478 aa17.15■□□□□ 0.34
ATXN3-253ENST00000621269 VPS13DQ5THJ4 4388 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 A8MTW9 85 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 CCNKO75909 580 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 IL7P13232 177 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 CNN1P51911 297 aaKnown RBP17.14■□□□□ 0.33
ATXN3-253ENST00000621269 PLP1P60201 277 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 TMEM14EPQ6UXP3 125 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 RNF182Q8N6D2 247 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 POM121L12Q8N7R1 296 aa17.14■□□□□ 0.33
ATXN3-253ENST00000621269 TRAV8-2A0A0B4J237 113 aa17.13■□□□□ 0.33
ATXN3-253ENST00000621269 FNDC10F2Z333 226 aa17.13■□□□□ 0.33
ATXN3-253ENST00000621269 TAS2R30P59541 319 aa17.13■□□□□ 0.33
ATXN3-253ENST00000621269 AMTNQ6UX39 209 aa17.13■□□□□ 0.33
ATXN3-253ENST00000621269 ZBTB8BQ8NAP8 495 aaPredicted RBP17.13■□□□□ 0.33
ATXN3-253ENST00000621269 ZNF738Q8NE65 137 aa17.13■□□□□ 0.33
ATXN3-253ENST00000621269 MITD1Q8WV92 249 aa17.13■□□□□ 0.33
ATXN3-253ENST00000621269 YTHDF2Q9Y5A9 579 aaKnown RBP17.13■□□□□ 0.33
ATXN3-253ENST00000621269 TSC22D2O75157 780 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 TEPPQ6URK8 271 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 FAM210BQ96KR6 192 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 UHRF2Q96PU4 802 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 ARL6Q9H0F7 186 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 PLA2G2EQ9NZK7 142 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 RNF24Q9Y225 148 aa17.12■□□□□ 0.33
ATXN3-253ENST00000621269 INSP01308 110 aa17.11■□□□□ 0.33
ATXN3-253ENST00000621269 OXA1LQ15070 435 aa17.11■□□□□ 0.33
ATXN3-253ENST00000621269 SPINK13Q1W4C9 94 aa17.11■□□□□ 0.33
ATXN3-253ENST00000621269 OR11H7Q8NGC8 314 aa17.11■□□□□ 0.33
ATXN3-253ENST00000621269 LRRC20Q8TCA0 184 aa17.11■□□□□ 0.33
ATXN3-253ENST00000621269 K7EPK0 472 aa17.1■□□□□ 0.33
ATXN3-253ENST00000621269 M0R2Z0 102 aa17.1■□□□□ 0.33
ATXN3-253ENST00000621269 HTN3P15516 51 aa17.1■□□□□ 0.33
ATXN3-253ENST00000621269 SLC38A11Q08AI6 406 aa17.1■□□□□ 0.33
ATXN3-253ENST00000621269 DNAH10Q8IVF4 4471 aa17.09■□□□□ 0.33
ATXN3-253ENST00000621269 GOSR2O14653 212 aa17.09■□□□□ 0.33
ATXN3-253ENST00000621269 ZNF846Q147U1 533 aa17.09■□□□□ 0.33
ATXN3-253ENST00000621269 PXDC1Q5TGL8 231 aa17.09■□□□□ 0.33
ATXN3-253ENST00000621269 C20orf85Q9H1P6 137 aa17.09■□□□□ 0.33
ATXN3-253ENST00000621269 RCL1Q9Y2P8 373 aaKnown RBP17.09■□□□□ 0.33
ATXN3-253ENST00000621269 A0A087X0K7 114 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 L7N2F9 121 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 MBPP02686 304 aaPredicted RBP17.08■□□□□ 0.32
ATXN3-253ENST00000621269 B2MP61769 119 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 DAD1P61803 113 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 VAMP2P63027 116 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 ZNF546Q86UE3 836 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 GGACTQ9BVM4 153 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 ARV1Q9H2C2 271 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 PPP1R14DQ9NXH3 145 aa17.08■□□□□ 0.32
ATXN3-253ENST00000621269 C7orf66A4D0T2 115 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 LYRM1O43325 122 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 CXCL3P19876 107 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 RHOBP62745 196 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 HIST1H1AQ02539 215 aaPredicted RBP17.07■□□□□ 0.32
ATXN3-253ENST00000621269 PATE2Q6UY27 113 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 LINC00336Q6ZUF6 198 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 UBE2DNLQ8IWF7 75 aa17.07■□□□□ 0.32
ATXN3-253ENST00000621269 ZNF705GA8MUZ8 300 aaPredicted RBP17.06■□□□□ 0.32
ATXN3-253ENST00000621269 BOLA2-SMG1P6H3BVE0 249 aa17.06■□□□□ 0.32
ATXN3-253ENST00000621269 AGPAT2O15120 278 aa17.06■□□□□ 0.32
ATXN3-253ENST00000621269 PLA2G10O15496 165 aa17.06■□□□□ 0.32
ATXN3-253ENST00000621269 CRXO43186 299 aaPredicted RBP17.06■□□□□ 0.32
ATXN3-253ENST00000621269 PSG3Q16557 428 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms