RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TMEM128Q5BJH2 165 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 GGNBP1Q5YKI7 109 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 CCDC190Q86UF4 302 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 OR8I2Q8N0Y5 310 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 TOMM5Q8N4H5 51 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 POM121L12Q8N7R1 296 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 PPP1R14BQ96C90 147 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 DOK5Q9P104 306 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 FLVCR2Q9UPI3 526 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 RFNGQ9Y644 331 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 MUC4Q99102 2169 aa8.12□□□□□ -1.11
CPNE3-210ENST00000621245 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 LOC102723971A0A1B0GUV8 181 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 ZNF98A6NK75 572 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 A8MTW9 85 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 SNRPGP15A8MWD9 76 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 ISLRO14498 428 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 SYNGR2O43760 224 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 HTN3P15516 51 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 ORM2P19652 201 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 NUP62P37198 522 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-210ENST00000621245 ID1P41134 155 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 RAB11AP62491 216 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 PSG9Q00887 426 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 SPANXN5Q5MJ07 72 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 RSG1Q9BU20 258 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 NDUFAF3Q9BU61 184 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 RBM38Q9H0Z9 239 aaKnown RBP8.11□□□□□ -1.11
CPNE3-210ENST00000621245 CACFD1Q9UGQ2 172 aa8.11□□□□□ -1.11
CPNE3-210ENST00000621245 YTHDF2Q9Y5A9 579 aaKnown RBP8.11□□□□□ -1.11
CPNE3-210ENST00000621245 PMS2P5A8MQ11 134 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 M0R2Z0 102 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 CRXO43186 299 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-210ENST00000621245 NOL3O60936 208 aaKnown RBP8.1□□□□□ -1.11
CPNE3-210ENST00000621245 SPART-AS1P0CW21 52 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 SLC25A6P12236 298 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 FAUP35544 74 aaKnown RBP8.1□□□□□ -1.11
CPNE3-210ENST00000621245 ATP5IP56385 69 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-210ENST00000621245 POLR2GP62487 172 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPNE3-210ENST00000621245 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
CPNE3-210ENST00000621245 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 BAP18Q8IXM2 172 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 NIPSNAP3BQ9BS92 247 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 TMED3Q9Y3Q3 217 aa8.1□□□□□ -1.11
CPNE3-210ENST00000621245 C9orf170A2RU37 121 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 ZNF705GA8MUZ8 300 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-210ENST00000621245 H3BRN7 92 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 P0DMU3 169 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 FAM231AP0DMU4 169 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 FAM231CP0DMU5 169 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 BTCP35070 178 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 CNN1P51911 297 aaKnown RBP8.09□□□□□ -1.11
CPNE3-210ENST00000621245 AKR1C1Q04828 323 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 BAK1Q16611 211 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 EBLN2Q6P2I7 272 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 TMEM88Q6PEY1 159 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 CENPSQ8N2Z9 138 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 OR11H7Q8NGC8 314 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 SRRQ9GZT4 340 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 RPRMQ9NS64 109 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 DNAH8Q96JB1 4490 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 FAT1Q14517 4588 aa8.09□□□□□ -1.11
CPNE3-210ENST00000621245 TRAV12-2A0A075B6T6 113 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 LINC00854A0A1B0GVQ3 168 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 SMCO3A2RU48 225 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 TMEM189A5PLL7 270 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 SSSCA1O60232 199 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 MED6O75586 246 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 FABP1P07148 127 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 AZU1P20160 251 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 AP3S2P59780 193 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 UBE2MP61081 183 aaKnown RBP8.08□□□□□ -1.12
CPNE3-210ENST00000621245 RRAS2P62070 204 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-210ENST00000621245 Q6ZR54 194 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 CYP2G1PQ6ZSU1 146 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 OR4D5Q8NGN0 318 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 IGF2BP2-AS1Q96M15 143 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 UHRF2Q96PU4 802 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 SDHCQ99643 169 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-210ENST00000621245 SLC25A21Q9BQT8 299 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-210ENST00000621245 C7orf50Q9BRJ6 194 aaKnown RBP8.08□□□□□ -1.12
CPNE3-210ENST00000621245 SLC25A39Q9BZJ4 359 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-210ENST00000621245 GOLT1BQ9Y3E0 138 aa8.08□□□□□ -1.12
CPNE3-210ENST00000621245 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 CCDC160A6NGH7 325 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 HBE1P02100 147 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 SNRPCP09234 159 aaKnown RBP8.07□□□□□ -1.12
CPNE3-210ENST00000621245 ANXA7P20073 488 aaKnown RBP8.07□□□□□ -1.12
CPNE3-210ENST00000621245 GALR1P47211 349 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 FGL1Q08830 312 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 ARL16Q0P5N6 197 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 FCN2Q15485 313 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 LINC00336Q6ZUF6 198 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms