RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 OR5B12Q96R08 314 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 MIEN1Q9BRT3 115 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 ANKRD17O75179 2603 aaKnown RBP7.84□□□□□ -1.15
VTA1-205ENST00000620996 IGHV7-81A0A0B4J1V7 117 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 CLDN34H7C241 214 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 RANP62826 216 aaKnown RBP7.84□□□□□ -1.15
VTA1-205ENST00000620996 OCIAD2Q56VL3 154 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 WDR73Q6P4I2 378 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 MEGF9Q9H1U4 602 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 HIGD1AQ9Y241 93 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 ABCA2Q9BZC7 2435 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 IGHV3OR16-8A0A075B7F1 116 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 VWC2LB2RUY7 222 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 K7EIM0 57 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 ATP6V0E1O15342 81 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 CRYGCP07315 174 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 TMEM256Q8N2U0 113 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 Q8N6K4 173 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 VAMP8Q9BV40 100 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 UBR5O95071 2799 aaPredicted RBP7.84□□□□□ -1.15
VTA1-205ENST00000620996 PTPN13Q12923 2485 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 MDFIC2A0A1B0GVS7 189 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 IL4P05112 153 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 IGLC1P0CG04 106 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 PRB4P10163 310 aaPredicted RBP7.83□□□□□ -1.16
VTA1-205ENST00000620996 ASPHD1Q5U4P2 390 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 CST9LQ9H4G1 147 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 GNB4Q9HAV0 340 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 USP9YO00507 2555 aaPredicted RBP7.83□□□□□ -1.16
VTA1-205ENST00000620996 A0A087WWC5 75 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 KIR2DL5BA0A0G2JN68 375 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 KIR2DL5BA0A0G2JPC4 375 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 B4DSR2 109 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 RNF223E7ERA6 249 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 G3V318 75 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 TMEM249Q2WGJ8 235 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 Q6ZN92 141 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 KIR2DL5AQ8N109 375 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 AJUBAQ96IF1 538 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 SRSF8Q9BRL6 282 aaKnown RBP7.83□□□□□ -1.16
VTA1-205ENST00000620996 THYN1Q9P016 225 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 FBXL7Q9UJT9 491 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.83□□□□□ -1.161e-6■■■■□ 23.5
VTA1-205ENST00000620996 LINC01548A6NM66 108 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 GGTLC3B5MD39 225 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 TGFAP01135 160 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 MGST1P10620 155 aaKnown RBP7.83□□□□□ -1.16
VTA1-205ENST00000620996 GALR1P47211 349 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 HIST2H2BCQ6DN03 193 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 FAM167A-AS1Q96KT0 104 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 SGK494Q96LW2 274 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 TXNDC17Q9BRA2 123 aa7.83□□□□□ -1.16
VTA1-205ENST00000620996 PSMB11A5LHX3 300 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 H3BUX3 64 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 K7EP13 123 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 MFAP4P55083 255 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 DSCR9P59020 149 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 EBI3Q14213 229 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 NHLRC2Q8NBF2 726 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 C21orf62Q9NYP8 219 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 NAV2Q8IVL1 2488 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 HELTA6NFD8 242 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 GNG4P50150 75 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 ZNF738Q8NE65 137 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 BTF3L4Q96K17 158 aa7.82□□□□□ -1.16
VTA1-205ENST00000620996 NPIPB5A8MRT5 1133 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 NUPR1O60356 82 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 SAP30O75446 220 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 GNG5P63218 68 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 PRR27Q6MZM9 219 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 FANCD2OSQ96PS1 177 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 TRBV20OR9-2A0A075B6H5 130 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 IGKV1-17P01599 117 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 HLA-DRB1P01911 266 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 PPBPP02775 128 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 SLC25A5P05141 298 aaKnown RBP7.81□□□□□ -1.16
VTA1-205ENST00000620996 SLC25A16P16260 332 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 FCGR2BP31994 310 aaPredicted RBP7.81□□□□□ -1.16
VTA1-205ENST00000620996 CENPWQ5EE01 88 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 OCC1Q8TAD7 63 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 FBN2P35556 2912 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 IGLV11-55A0A075B6I3 123 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 PPP5D1E7EU14 171 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 TTC9CQ8N5M4 171 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 OR2D3Q8NGH3 330 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 CTDSP1Q9GZU7 261 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 MOB4Q9Y3A3 225 aa7.81□□□□□ -1.16
VTA1-205ENST00000620996 CHD6Q8TD26 2715 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 GRIFINA4D1Z8 144 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 AVPP01185 164 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 GPR183P32249 361 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 HNRNPA3P51991 378 aaKnown RBP7.8□□□□□ -1.16
VTA1-205ENST00000620996 FAM3BP58499 235 aaPredicted RBP7.8□□□□□ -1.16
VTA1-205ENST00000620996 RHOGP84095 191 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 C15orf32Q32M92 178 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 PVRIGQ6DKI7 326 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms