RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 PRR20EP86478 221 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 PRR20CP86479 221 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 PRR20DP86480 221 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 PRR20BP86481 221 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 PRR20AP86496 221 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 SAPCD1Q5SSQ6 148 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 TMEM70Q9BUB7 260 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 C1RLQ9NZP8 487 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 TRAV9-1A0A075B6T8 112 aa5.65□□□□□ -1.51
NEDD9-216ENST00000620854 C7orf71A4D174 169 aa5.65□□□□□ -1.51
NEDD9-216ENST00000620854 VWC2LB2RUY7 222 aa5.65□□□□□ -1.51
NEDD9-216ENST00000620854 RPL13AP40429 203 aaKnown RBP5.65□□□□□ -1.51
NEDD9-216ENST00000620854 C11orf52Q96A22 123 aa5.65□□□□□ -1.51
NEDD9-216ENST00000620854 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.51
NEDD9-216ENST00000620854 RELNP78509 3460 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 IGKV3-15P01624 115 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 FXYD7P58549 80 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 HBBP68871 147 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV2-26A0A0B4J1V2 119 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 TRAV8-6A0A0B4J262 113 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV3-66A0A0C4DH42 116 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 IGLC7A0M8Q6 106 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 RIPPLY3P57055 190 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 TMEM249Q2WGJ8 235 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 MRPL52Q86TS9 123 aaKnown RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 OR10AG1Q8NH19 301 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 GRAMD2BQ96HH9 432 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 MRPL20Q9BYC9 149 aaKnown RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 TLN1Q9Y490 2541 aaKnown RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 MAP1AP78559 2803 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 TRAV8-1A0A0A6YYK1 113 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 E7EUB6 86 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 PEX7O00628 323 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 LOXL3P58215 753 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 PNKDQ8N490 385 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 SPTBN4Q9H254 2564 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 PPIAL4CA0A0B4J2A2 164 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 A0A1W2PNU3 283 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 C2orf70A6NJV1 201 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 M0R3E3 92 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 PPIAL4GP0DN37 164 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 COX6B1P14854 86 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 WT1P19544 449 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 TMEM78Q5T7P6 136 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 IGFL3Q6UXB1 125 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 RNASE6Q93091 150 aaKnown RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 PLSCR4Q9NRQ2 329 aa5.64□□□□□ -1.51
NEDD9-216ENST00000620854 MRPS16Q9Y3D3 137 aaKnown RBP5.64□□□□□ -1.51
NEDD9-216ENST00000620854 APOHP02749 345 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 FABP2P12104 132 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 DLX1P56177 255 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 FOXE3Q13461 319 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 IGF2-ASQ6U949 168 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 OR1N2Q8NGR9 330 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 CST9LQ9H4G1 147 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV3OR16-10A0A075B7F0 116 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV2-70DA0A0C4DH43 119 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV1-69-2A0A0G2JMI3 117 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 MBD3L4A6NDZ8 208 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 MBD3L3A6NE82 208 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 MBD3L5A6NJ08 208 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 SAA1P0DJI8 122 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 BSPH1Q075Z2 132 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 LINC00322Q6ZN03 302 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 MBD3L2Q8NHZ7 208 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 KBTBD11-OT1A0A1B0GTJ5 212 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 B9A039 149 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 ANKRD39Q53RE8 183 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 Q71RC1 249 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 C16orf92Q96LL3 132 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 HIST1H4GQ99525 98 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 SPRY4Q9C004 299 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 FNDC4Q9H6D8 234 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-216ENST00000620854 TMEM14BQ9NUH8 114 aa5.63□□□□□ -1.51
NEDD9-216ENST00000620854 ANKHD1Q8IWZ3 2542 aaKnown RBP5.62□□□□□ -1.51
NEDD9-216ENST00000620854 H0YJW9 148 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 SAP30O75446 220 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 PRSS2P07478 247 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 APOBEC3AP31941 199 aaPredicted RBP5.62□□□□□ -1.51
NEDD9-216ENST00000620854 MSMPQ1L6U9 139 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 SFTA2Q6UW10 78 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 TEX45Q8NA69 505 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 RALYQ9UKM9 306 aaKnown RBP5.62□□□□□ -1.51
NEDD9-216ENST00000620854 FOXA2Q9Y261 457 aaPredicted RBP5.62□□□□□ -1.51
NEDD9-216ENST00000620854 LY96Q9Y6Y9 160 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 LRBAP50851 2863 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 LIPFP07098 398 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 PF4V1P10720 104 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 CDKN1BP46527 198 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 IGF2BP2-AS1Q96M15 143 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 SLC25A2Q9BXI2 301 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 TMEM160Q9NX00 188 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 DSCAML1Q8TD84 2053 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 A0A1W2PRE2 83 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 GAGE12BA1L429 117 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 LYNX1G3V0Z9 82 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 SYS1-DBNDD2H3BUS1 97 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 IGKV3-20P01619 116 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms