RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TENM3Q9P273 2699 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 B2MP61769 119 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 SNRPD3P62318 126 aaKnown RBP13.51□□□□□ -0.25
LITAF-220ENST00000620789 LINC00305Q7Z4B0 112 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 TMEM37Q8WXS4 190 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 RCHY1Q96PM5 261 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 WDR61Q9GZS3 305 aaKnown RBP13.51□□□□□ -0.25
LITAF-220ENST00000620789 SLC39A9Q9NUM3 307 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 RNF24Q9Y225 148 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 PXMP4Q9Y6I8 212 aa13.51□□□□□ -0.25
LITAF-220ENST00000620789 STAB2Q8WWQ8 2551 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 SOCS3O14543 225 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 RPL35AP18077 110 aaKnown RBP13.5□□□□□ -0.25
LITAF-220ENST00000620789 RPL7P18124 248 aaKnown RBP13.5□□□□□ -0.25
LITAF-220ENST00000620789 MEOX2P50222 304 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 APOC4P55056 127 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 Q5BKY6 102 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 C10orf113Q5VZT2 155 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 OR1L4Q8NGR5 311 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 RSG1Q9BU20 258 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 DNAJC4Q9NNZ3 241 aa13.5□□□□□ -0.25
LITAF-220ENST00000620789 KIR2DL5BA0A0G2JN68 375 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 KIR2DL5BA0A0G2JPC4 375 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 ID1P41134 155 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 PSMB3P49720 205 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 SAMD13Q5VXD3 122 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 KIR2DL5AQ8N109 375 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 C17orf77Q96MU5 243 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 PFDN5Q99471 154 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 SMIM3Q9BZL3 60 aa13.49□□□□□ -0.25
LITAF-220ENST00000620789 ISLRO14498 428 aa13.48□□□□□ -0.25
LITAF-220ENST00000620789 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.48□□□□□ -0.25
LITAF-220ENST00000620789 OR2T35Q8NGX2 323 aa13.48□□□□□ -0.25
LITAF-220ENST00000620789 RETNQ9HD89 108 aa13.48□□□□□ -0.25
LITAF-220ENST00000620789 UBE2CO00762 179 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 IFNA5P01569 189 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 ATF4P18848 351 aaPredicted RBP13.47□□□□□ -0.25
LITAF-220ENST00000620789 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 STHQ8IWL8 128 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 ZNF709Q8N972 641 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 AQP10Q96PS8 301 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 KCNIP2Q9NS61 270 aa13.47□□□□□ -0.25
LITAF-220ENST00000620789 KNCNA6PVL3 124 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 C17orf112F2Z3M2 114 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 MRPS12O15235 138 aaKnown RBP13.46□□□□□ -0.25
LITAF-220ENST00000620789 ACTL10Q5JWF8 245 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 GATAD1Q8WUU5 269 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 C16orf92Q96LL3 132 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 LINC00052Q96N35 136 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 WFDC1Q9HC57 220 aa13.46□□□□□ -0.25
LITAF-220ENST00000620789 A0A087X0K7 114 aa13.45□□□□□ -0.26
LITAF-220ENST00000620789 TRPT1Q86TN4 253 aaKnown RBP13.45□□□□□ -0.26
LITAF-220ENST00000620789 BPIFA4PQ86YQ2 179 aa13.45□□□□□ -0.26
LITAF-220ENST00000620789 SCGB1C1Q8TD33 95 aa13.45□□□□□ -0.26
LITAF-220ENST00000620789 PARD6GQ9BYG4 376 aaPredicted RBP13.45□□□□□ -0.26
LITAF-220ENST00000620789 CSTL1Q9H114 145 aa13.45□□□□□ -0.26
LITAF-220ENST00000620789 FXYD6-FXYD2A0A087WZ82 144 aa13.44□□□□□ -0.26
LITAF-220ENST00000620789 G3V3Q6 166 aa13.44□□□□□ -0.26
LITAF-220ENST00000620789 GCSAMLQ5JQS6 135 aa13.44□□□□□ -0.26
LITAF-220ENST00000620789 Q6ZWC4 215 aa13.44□□□□□ -0.26
LITAF-220ENST00000620789 DEFB135Q30KP9 77 aa13.43□□□□□ -0.26
LITAF-220ENST00000620789 INO80EQ8NBZ0 244 aaPredicted RBP13.43□□□□□ -0.26
LITAF-220ENST00000620789 WWC2-AS2Q96NR7 200 aa13.43□□□□□ -0.26
LITAF-220ENST00000620789 OVOL2Q9BRP0 275 aa13.43□□□□□ -0.26
LITAF-220ENST00000620789 TNFSF18Q9UNG2 199 aa13.43□□□□□ -0.26
LITAF-220ENST00000620789 TRAV8-2A0A0B4J237 113 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 TRAV5A0A0B4J249 113 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 RNF222A6NCQ9 220 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 HLA-DRB4P13762 266 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 FOXI2Q6ZQN5 318 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 C20orf173Q96LM9 149 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
LITAF-220ENST00000620789 RPRMQ9NS64 109 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 TP53TG1Q9Y2A0 90 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 HLA-DRB4X5D2U9 266 aa13.42□□□□□ -0.26
LITAF-220ENST00000620789 H3BMM0 161 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
LITAF-220ENST00000620789 IGLC2P0DOY2 106 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 SPP1P10451 314 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 CXCL2P19875 107 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 DEFB1P60022 68 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 ZNF266Q14584 549 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 GDF5OSQ5U4N7 250 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
LITAF-220ENST00000620789 LCN15Q6UWW0 184 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 AGRNO00468 2067 aa13.41□□□□□ -0.26
LITAF-220ENST00000620789 SPRY2O43597 315 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 IGFL4Q6B9Z1 124 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 RNF182Q8N6D2 247 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 LRRC20Q8TCA0 184 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 RNF183Q96D59 192 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 HRH4Q9H3N8 390 aa13.4□□□□□ -0.26
LITAF-220ENST00000620789 SMLR1H3BR10 107 aa13.39□□□□□ -0.27
LITAF-220ENST00000620789 SNRPCP09234 159 aaKnown RBP13.39□□□□□ -0.27
LITAF-220ENST00000620789 SPATA31B1PQ5VZV4 182 aa13.39□□□□□ -0.27
LITAF-220ENST00000620789 EBLN2Q6P2I7 272 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms