RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 EBI3Q14213 229 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 OR10G8Q8NGN5 311 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 OR51M1Q9H341 326 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 PLXNB1O43157 2135 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 TRAV9-1A0A075B6T8 112 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 A0A1W2PPQ1 181 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 OR10J4P0C629 311 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 CRYBB3P26998 211 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 RBM14Q96PK6 669 aaKnown RBP16.81■□□□□ 0.28
SGMS1-210ENST00000619438 CITED1Q99966 193 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 AURKAIP1Q9NWT8 199 aaPredicted RBP16.81■□□□□ 0.28
SGMS1-210ENST00000619438 TRRAPQ9Y4A5 3859 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 K7EN84 100 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 KRTAP10-3P60369 221 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 SUMO1P63165 101 aaKnown RBP16.81■□□□□ 0.28
SGMS1-210ENST00000619438 C5orf64Q2M2E5 130 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 LINC00305Q7Z4B0 112 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 ZNF702PQ9H963 129 aa16.81■□□□□ 0.28
SGMS1-210ENST00000619438 CNIH1O95406 144 aa16.8■□□□□ 0.28
SGMS1-210ENST00000619438 S100A9P06702 114 aaKnown RBP16.8■□□□□ 0.28
SGMS1-210ENST00000619438 GNG4P50150 75 aa16.8■□□□□ 0.28
SGMS1-210ENST00000619438 C19orf35Q6ZS72 473 aa16.8■□□□□ 0.28
SGMS1-210ENST00000619438 Q8N6K4 173 aa16.8■□□□□ 0.28
SGMS1-210ENST00000619438 FXYD5Q96DB9 178 aa16.8■□□□□ 0.28
SGMS1-210ENST00000619438 WNT10AQ9GZT5 417 aa16.8■□□□□ 0.28
SGMS1-210ENST00000619438 HYPMO75409 117 aa16.79■□□□□ 0.28
SGMS1-210ENST00000619438 TMEM11P17152 192 aa16.79■□□□□ 0.28
SGMS1-210ENST00000619438 IGLC1P0CG04 106 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 APELAP0DMC3 54 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 TAS2R60P59551 318 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 CENPWQ5EE01 88 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 ACTL10Q5JWF8 245 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 KLHDC1Q8N7A1 406 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 M0QZK8 103 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 FXYD3Q14802 87 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 FBLN7Q53RD9 439 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 C9orf152Q5JTZ5 239 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 ZNF562Q6V9R5 426 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 Q6ZS46 218 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 Q8N2B8 174 aa16.78■□□□□ 0.28
SGMS1-210ENST00000619438 PYYP10082 97 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 MYCNOSP40205 109 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 C11orf44Q8N8P7 122 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 IGF2BP2-AS1Q96M15 143 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 SERTAD4Q9NUC0 356 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 IL36BQ9NZH7 164 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 MOB4Q9Y3A3 225 aa16.77■□□□□ 0.28
SGMS1-210ENST00000619438 IFITM10A6NMD0 228 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 NPIPB5A8MRT5 1133 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 K7EIM0 57 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 GCGP01275 180 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 ORM2P19652 201 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 TIGITQ495A1 244 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 COA6Q5JTJ3 125 aaKnown RBP16.76■□□□□ 0.27
SGMS1-210ENST00000619438 ZNF329Q86UD4 541 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 OR1B1Q8NGR6 318 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 VWFP04275 2813 aa16.76■□□□□ 0.27
SGMS1-210ENST00000619438 M0QZ24 198 aa16.75■□□□□ 0.27
SGMS1-210ENST00000619438 FABP1P07148 127 aa16.75■□□□□ 0.27
SGMS1-210ENST00000619438 HIST3H2BBQ8N257 126 aa16.75■□□□□ 0.27
SGMS1-210ENST00000619438 OSTCQ9NRP0 149 aa16.75■□□□□ 0.27
SGMS1-210ENST00000619438 MGAM2Q2M2H8 2515 aa16.75■□□□□ 0.27
SGMS1-210ENST00000619438 SH2D7A6NKC9 451 aaPredicted RBP16.75■□□□□ 0.27
SGMS1-210ENST00000619438 NCBP2LA6PVI3 153 aaKnown RBP16.75■□□□□ 0.27
SGMS1-210ENST00000619438 TMEM190Q8WZ59 177 aa16.75■□□□□ 0.27
SGMS1-210ENST00000619438 GAR1Q9NY12 217 aaKnown RBP16.75■□□□□ 0.27
SGMS1-210ENST00000619438 ISLRO14498 428 aa16.74■□□□□ 0.27
SGMS1-210ENST00000619438 IGLV2-8P01709 118 aa16.74■□□□□ 0.27
SGMS1-210ENST00000619438 PRR31Q5SQ13 230 aa16.74■□□□□ 0.27
SGMS1-210ENST00000619438 IGHV3-21A0A0B4J1V1 117 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 ZNF320A2RRD8 509 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 PSG1P11464 419 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 TMEM95Q3KNT9 176 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 RASL11BQ9BPW5 248 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 HIGD1AQ9Y241 93 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 V9GYV3 84 aa16.73■□□□□ 0.27
SGMS1-210ENST00000619438 PEX7O00628 323 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 IGKV1-17P01599 117 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 AMY1AP04745 511 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 GP9P14770 177 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 CNN1P51911 297 aaKnown RBP16.72■□□□□ 0.27
SGMS1-210ENST00000619438 CX3CL1P78423 397 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 TTC9CQ8N5M4 171 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 ARPC1AQ92747 370 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 TMEM14CQ9P0S9 112 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 S100A2P29034 98 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 ERVFC1-1P60608 527 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 YPEL3P61236 119 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-210ENST00000619438 S100A12P80511 92 aa16.72■□□□□ 0.27
SGMS1-210ENST00000619438 MRPL27Q9P0M9 148 aaKnown RBP16.72■□□□□ 0.27
SGMS1-210ENST00000619438 IGLV11-55A0A075B6I3 123 aa16.71■□□□□ 0.27
SGMS1-210ENST00000619438 NBEAP1P0C6P0 100 aa16.71■□□□□ 0.27
SGMS1-210ENST00000619438 ASPHD1Q5U4P2 390 aa16.71■□□□□ 0.27
SGMS1-210ENST00000619438 TMEM183AQ8IXX5 376 aa16.71■□□□□ 0.27
SGMS1-210ENST00000619438 TRAV30A0A087WSZ9 112 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 RD3LP0DJH9 198 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 RPEL1Q2QD12 228 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 HIST2H2BDQ6DRA6 164 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 C5orf56Q8N8D9 126 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 SMIM12Q96EX1 92 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms