RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 CCDC28AQ8IWP9 274 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 ELOVL1Q9BW60 279 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 DAZ1Q9NQZ3 744 aaKnown RBP8.97□□□□□ -0.97
PDPN-211ENST00000617617 IGHV4OR15-8A0A075B7B6 117 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 A0A087WW49 117 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 FAM74A7A6NL05 159 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 CD28P10747 220 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 NDUFA11Q86Y39 141 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 A0A1W2PS18 150 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 ADARB2-AS1A8MUL3 147 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 BMI1P35226 326 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 RPEL1Q2QD12 228 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 UNQ9165/PRO28630Q6UXU0 137 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 GLMPQ8WWB7 406 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 TMPRSS5Q9H3S3 457 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 GNG13Q9P2W3 67 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 MTORP42345 2549 aa8.96□□□□□ -0.97
PDPN-211ENST00000617617 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.98
PDPN-211ENST00000617617 KRBOX1C9JBD0 128 aa8.96□□□□□ -0.98
PDPN-211ENST00000617617 TMEM250H0YL14 139 aa8.96□□□□□ -0.98
PDPN-211ENST00000617617 OR7C2O60412 319 aa8.96□□□□□ -0.98
PDPN-211ENST00000617617 MEF2BQ02080 365 aaPredicted RBP8.96□□□□□ -0.98
PDPN-211ENST00000617617 TMEM231Q9H6L2 316 aa8.96□□□□□ -0.98
PDPN-211ENST00000617617 F6UZH7 168 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 PDE6DO43924 150 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 UBE2L3P68036 154 aaKnown RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 TOR2AQ5JU69 321 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 OR1N2Q8NGR9 330 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 C11orf52Q96A22 123 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 NARS2Q96I59 477 aaKnown RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 HOXD3P31249 432 aaPredicted RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 CD81P60033 236 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 SIGLEC8Q9NYZ4 499 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 TRBV19A0A075B6N1 114 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 NBEAP1P0C6P0 100 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 KLHL30-AS1Q8NEE0 82 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 OR4F17Q8NGA8 305 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 GRAMD2BQ96HH9 432 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 OR4F4Q96R69 305 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 RARRES2Q99969 163 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 SLC35B3Q9H1N7 401 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 ZNF586Q9NXT0 402 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 SMPXQ9UHP9 88 aa8.95□□□□□ -0.98
PDPN-211ENST00000617617 YTHDF2Q9Y5A9 579 aaKnown RBP8.95□□□□□ -0.98
PDPN-211ENST00000617617 TMEM213A2RRL7 107 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 PYYP10082 97 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 KRTAP10-3P60369 221 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.94□□□□□ -0.98
PDPN-211ENST00000617617 CITED2Q99967 270 aaPredicted RBP8.94□□□□□ -0.98
PDPN-211ENST00000617617 EIF5A2Q9GZV4 153 aaKnown RBP8.94□□□□□ -0.98
PDPN-211ENST00000617617 CLEC5AQ9NY25 188 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 NF1P21359 2839 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 PAGE4O60829 102 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 HAGHQ16775 308 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 SAMD13Q5VXD3 122 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 C18orf65Q6ZTR6 163 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 RAX2Q96IS3 184 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 C17orf77Q96MU5 243 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 SEC11CQ9BY50 192 aa8.94□□□□□ -0.98
PDPN-211ENST00000617617 CARHSP1Q9Y2V2 147 aaKnown RBP8.94□□□□□ -0.98
PDPN-211ENST00000617617 CHEK1O14757 476 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 GALR1P47211 349 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 CITED1Q99966 193 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 OTORQ9NRC9 128 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 A0A1B0GV50 99 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 C9JQL5 133 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 C11orf94C9JXX5 98 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 H3BQ15 152 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 EIF3GO75821 320 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDPN-211ENST00000617617 NDUFB4O95168 129 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 PSG9Q00887 426 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 FAM74A3Q4VXF1 159 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 FAM90A2PQ658T7 463 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 OR11H1Q8NG94 326 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 RPUSD4Q96CM3 377 aaKnown RBP8.93□□□□□ -0.98
PDPN-211ENST00000617617 PEMTQ9UBM1 199 aa8.93□□□□□ -0.98
PDPN-211ENST00000617617 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
PDPN-211ENST00000617617 OR5B12Q96R08 314 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 IGHV3-35A0A0C4DH35 117 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 HELTA6NFD8 242 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 GGTLC3B5MD39 225 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 APOHP02749 345 aaPredicted RBP8.92□□□□□ -0.98
PDPN-211ENST00000617617 OR10J4P0C629 311 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 OR8I2Q8N0Y5 310 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 RXFP4Q8TDU9 374 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 CITED4Q96RK1 184 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 SLC50A1Q9BRV3 221 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 C20orf24Q9BUV8 137 aa8.92□□□□□ -0.98
PDPN-211ENST00000617617 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 TRBV6-1A0A0K0K1D8 114 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 C2orf70A6NJV1 201 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 CCL24O00175 119 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 AWAT1Q58HT5 328 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms