RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MORN5Q5VZ52 161 aa11.63□□□□□ -0.55
SHROOM1-208ENST00000617339 ASCL2Q99929 193 aa11.63□□□□□ -0.55
SHROOM1-208ENST00000617339 IGHV1-8P0DP01 117 aa11.63□□□□□ -0.55
SHROOM1-208ENST00000617339 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
SHROOM1-208ENST00000617339 DSCAML1Q8TD84 2053 aa11.63□□□□□ -0.55
SHROOM1-208ENST00000617339 K7ERU9 68 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 COL8A1P27658 744 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 ADORA2A-AS1P86434 159 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 CHODLQ9H9P2 273 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 MRPL36Q9P0J6 103 aaKnown RBP11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 CORTO00230 105 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 TMEM14BQ9NUH8 114 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 C9JCJ5 164 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 LINC00869P0C866 280 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 SSX8Q7RTT4 187 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 OR1B1Q8NGR6 318 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 NRGNQ92686 78 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 ADTRPQ96IZ2 230 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 ZANQ9Y493 2812 aa11.62□□□□□ -0.55
SHROOM1-208ENST00000617339 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 GOSR1O95249 250 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 KIR2DS2P43631 304 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 PPOXP50336 477 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 PSG9Q00887 426 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 OR1L8Q8NGR8 309 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 C1orf159Q96HA4 380 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 IGHV3-23P01764 117 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 ZNF137PP52743 207 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 GDF5OSQ5U4N7 250 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 CSTL1Q9H114 145 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 SORL1Q92673 2214 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 HECTD1Q9ULT8 2610 aa11.61□□□□□ -0.55
SHROOM1-208ENST00000617339 DOPEY1Q5JWR5 2465 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 MPDU1O75352 247 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 PPBPP02775 128 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 ZNF138P52744 262 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 LY6EQ16553 131 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 TMEM70Q9BUB7 260 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 ZNF835Q9Y2P0 537 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 PRSS47A8MTI9 375 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 TMEM238C9JI98 176 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 ECSCRQ19T08 205 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 TMEM133Q9H2Q1 129 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 HSBP1L1C9JCN9 74 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 CSN3P07498 182 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 BVES-AS1Q5T3Y7 98 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 FNDC4Q9H6D8 234 aaPredicted RBP11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
SHROOM1-208ENST00000617339 IZUMO1RA6ND01 250 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 LIPFP07098 398 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 PRCDQ00LT1 54 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 SLC25A34Q6PIV7 304 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 COX7A2P2O60397 106 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 HTR1DP28221 377 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 CR1LQ2VPA4 569 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
SHROOM1-208ENST00000617339 C2orf70A6NJV1 201 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 C22orf46C9J442 243 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 LINC00527Q9UJ94 153 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 ZFHX3Q15911 3703 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 IGKV3-7A0A075B6H7 116 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 A0A1W2PPI3 338 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 TCF24Q7RTU0 167 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 JKAMPQ9P055 326 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 NUP35Q8NFH5 326 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 BPESC1Q9GZL8 116 aa11.58□□□□□ -0.56
SHROOM1-208ENST00000617339 TIMM23O14925 209 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 RPL27AP46776 148 aaKnown RBP11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 FOXE3Q13461 319 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 CCL19Q99731 98 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 CHRDL1Q9BU40 450 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 GNG7O60262 68 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 LYZP61626 148 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 TMEM249Q2WGJ8 235 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 TMEM155Q4W5P6 130 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 KHDC1LQ5JSQ8 128 aa11.57□□□□□ -0.56
SHROOM1-208ENST00000617339 IGHV3OR16-13A0A075B7E8 117 aa11.56□□□□□ -0.56
SHROOM1-208ENST00000617339 IGHV3-74A0A0B4J1X5 117 aa11.56□□□□□ -0.56
SHROOM1-208ENST00000617339 A0A1W2PPR1 153 aa11.56□□□□□ -0.56
SHROOM1-208ENST00000617339 HIGD1CA8MV81 97 aa11.56□□□□□ -0.56
SHROOM1-208ENST00000617339 ISLRO14498 428 aa11.56□□□□□ -0.56
SHROOM1-208ENST00000617339 IGLV2-8P01709 118 aa11.56□□□□□ -0.56
SHROOM1-208ENST00000617339 GNG5P63218 68 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms