RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 DNAH1Q9P2D7 4330 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 ISLRO14498 428 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 HLA-DRB4P13762 266 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 ZNF546Q86UE3 836 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 CSNK1G2-AS1Q8NCQ2 148 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 ARV1Q9H2C2 271 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
LHX1-202ENST00000616237 OR5AC2Q9NZP5 309 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 WDR83OSQ9Y284 106 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 HLA-DRB4X5D2U9 266 aa12.39□□□□□ -0.43
LHX1-202ENST00000616237 TRAV8-2A0A0B4J237 113 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 F6UB75 175 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 ID1P41134 155 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 LRRC37A5PQ49AS3 106 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 IGFL4Q6B9Z1 124 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 TMEM37Q8WXS4 190 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 UQCC1Q9NVA1 299 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 CLEC5AQ9NY25 188 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 RYR2Q92736 4967 aa12.38□□□□□ -0.43
LHX1-202ENST00000616237 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
LHX1-202ENST00000616237 S100A11P31949 105 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 CAMLGP49069 296 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 MEOX2P50222 304 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 PRR20EP86478 221 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 PRR20CP86479 221 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 PRR20DP86480 221 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 PRR20BP86481 221 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 PRR20AP86496 221 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 NHLH2Q02577 135 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 MORN5Q5VZ52 161 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 GPR82Q96P67 336 aa12.37□□□□□ -0.43
LHX1-202ENST00000616237 UBE2L5PA0A1B0GUS4 154 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 ATF4P18848 351 aaPredicted RBP12.36□□□□□ -0.43
LHX1-202ENST00000616237 S100A7P31151 101 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 PXDC1Q5TGL8 231 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 MIC13Q5XKP0 118 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 FOXI2Q6ZQN5 318 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 STX12Q86Y82 276 aa12.36□□□□□ -0.43
LHX1-202ENST00000616237 ZNF705EA8MWA4 302 aaPredicted RBP12.35□□□□□ -0.43
LHX1-202ENST00000616237 DEFB4AO15263 64 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 SSNA1O43805 119 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 RPL7P18124 248 aaKnown RBP12.35□□□□□ -0.43
LHX1-202ENST00000616237 TMEM41BQ5BJD5 291 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 LINC00305Q7Z4B0 112 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 Q8NAQ8 132 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 PPP1R1CQ8WVI7 109 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 XCL2Q9UBD3 114 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 X6R8D5 127 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 ALMS1Q8TCU4 4167 aa12.35□□□□□ -0.43
LHX1-202ENST00000616237 E5RGE8 158 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 HBG1P69891 147 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 HBG2P69892 147 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 CYCSP99999 105 aaKnown RBP12.34□□□□□ -0.43
LHX1-202ENST00000616237 BAXQ07812 192 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 FGL1Q08830 312 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 PMS2P11Q13670 270 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 OPCMLQ14982 345 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 SAMD13Q5VXD3 122 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 RNF182Q8N6D2 247 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
LHX1-202ENST00000616237 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
LHX1-202ENST00000616237 A0A087X0K7 114 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 A0A0J9YX75 114 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 RLN2P04090 185 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
LHX1-202ENST00000616237 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 HLA-DMBP28068 263 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 FXYD7P58549 80 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
LHX1-202ENST00000616237 ATP6V1FQ16864 119 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 OR5C1Q8NGR4 320 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 CLUHP3Q96NS8 147 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 ALG5Q9Y673 324 aa12.33□□□□□ -0.44
LHX1-202ENST00000616237 IGHV4-28A0A0C4DH34 117 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 LCE6AA0A183 80 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 MPC2O95563 127 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 PTTG1O95997 202 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 SNRPCP09234 159 aaKnown RBP12.32□□□□□ -0.44
LHX1-202ENST00000616237 FGF7P21781 194 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 RPL29P47914 159 aaKnown RBP12.32□□□□□ -0.44
LHX1-202ENST00000616237 RAB31Q13636 194 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 FAM78BQ5VT40 261 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 OR4B1Q8NGF8 309 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 CHAC2Q8WUX2 184 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 SLC35B3Q9H1N7 401 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 DNAJC4Q9NNZ3 241 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 SLC39A9Q9NUM3 307 aa12.32□□□□□ -0.44
LHX1-202ENST00000616237 ELOA3CA0A087WX78 387 aaPredicted RBP12.31□□□□□ -0.44
LHX1-202ENST00000616237 TRAV5A0A0B4J249 113 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 A8MTW9 85 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 CXCL3P19876 107 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
LHX1-202ENST00000616237 C10orf113Q5VZT2 155 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 SPATA31B1PQ5VZV4 182 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms