RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NEU4Q8WWR8 484 aaPredicted RBP15.39■□□□□ 0.05
SPAST-203ENST00000615843 ABCA7Q8IZY2 2146 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 GGTLC3B5MD39 225 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 ITLN2Q8WWU7 325 aaPredicted RBP15.38■□□□□ 0.05
SPAST-203ENST00000615843 PTPRDP23468 1912 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 H0YJW9 148 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 TNFRSF6BO95407 300 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 IL18BPO95998 194 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 C1orf122Q6ZSJ8 110 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 FAM57AQ8TBR7 257 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 SBF1O95248 1867 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 SLAQ13239 276 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 ZNF114Q8NC26 417 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 LYPD6BQ8NI32 183 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
SPAST-203ENST00000615843 NCOR1P1Q9H4R4 102 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 DOCK11Q5JSL3 2073 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 K7EP34 96 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 ZNF562Q6V9R5 426 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 ZNF492Q9P255 531 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 NPC2P61916 151 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 SIGLEC15Q6ZMC9 328 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 TMEM8BA6NDV4 472 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 IL15RAQ13261 267 aa15.37■□□□□ 0.05
SPAST-203ENST00000615843 C11orf68Q9H3H3 251 aaKnown RBP15.36■□□□□ 0.05
SPAST-203ENST00000615843 KIAA2026Q5HYC2 2103 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 ATP5J2P56134 94 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 LCNL1Q6ZST4 164 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 TRAV40A0A0B4J280 105 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 PRR19A6NJB7 356 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 TMEM200BQ69YZ2 307 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 C9JAW5 83 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 VDAC2P45880 294 aaPredicted RBP15.36■□□□□ 0.05
SPAST-203ENST00000615843 DPH3P1Q9H4G8 78 aa15.36■□□□□ 0.05
SPAST-203ENST00000615843 CT83Q5H943 113 aa15.35■□□□□ 0.05
SPAST-203ENST00000615843 MORN3Q6PF18 240 aaPredicted RBP15.35■□□□□ 0.05
SPAST-203ENST00000615843 COX8AP10176 69 aa15.35■□□□□ 0.05
SPAST-203ENST00000615843 SP9P0CG40 484 aa15.35■□□□□ 0.05
SPAST-203ENST00000615843 ETDBQ3ZM63 59 aa15.35■□□□□ 0.05
SPAST-203ENST00000615843 IGHV1-24A0A0C4DH33 117 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 ZNF883P0CG24 379 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 IGHV1-8P0DP01 117 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 PAX8Q06710 450 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 CFAP161Q6P656 301 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 GVINP1Q7Z2Y8 2422 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 IGKV1-39P01597 117 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 IGKV1D-39P04432 117 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 DEFB104AQ8WTQ1 72 aa15.34■□□□□ 0.05
SPAST-203ENST00000615843 DUSP14O95147 198 aaKnown RBP15.33■□□□□ 0.05
SPAST-203ENST00000615843 CFHR2P36980 270 aa15.33■□□□□ 0.05
SPAST-203ENST00000615843 C17orf82Q86X59 251 aaPredicted RBP15.33■□□□□ 0.05
SPAST-203ENST00000615843 CACNA1EQ15878 2313 aa15.33■□□□□ 0.05
SPAST-203ENST00000615843 FANCMQ8IYD8 2048 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 IGHV1-3A0A0C4DH29 117 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 LYNX1G3V0Z9 82 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 LYNX1P0DP58 116 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 PHF3Q92576 2039 aaKnown RBP15.33■□□□□ 0.04
SPAST-203ENST00000615843 BVES-AS1Q5T3Y7 98 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 KLF12Q9Y4X4 402 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 IGKV1D-17A0A075B6S4 117 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 KIR2DL5BA0A0G2JN68 375 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 KIR2DL5BA0A0G2JPC4 375 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 SMIM27A0A1W2PRY6 76 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 KIR2DL5AQ8N109 375 aa15.33■□□□□ 0.04
SPAST-203ENST00000615843 TRGV11A0A075B6L2 103 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 ZFP36L1Q07352 338 aaKnown RBP15.32■□□□□ 0.04
SPAST-203ENST00000615843 CSTL1Q9H114 145 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 VCYO14598 125 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 TMEM213A2RRL7 107 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 C15orf32Q32M92 178 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 WIPF3A6NGB9 483 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 IGKV1-16P04430 117 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 FAM231DQ6ZW35 169 aa15.32■□□□□ 0.04
SPAST-203ENST00000615843 F8W1H4 67 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 WFDC12Q8WWY7 111 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 TRGV2A0A075B6R0 118 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 ZNF474Q6S9Z5 364 aaPredicted RBP15.31■□□□□ 0.04
SPAST-203ENST00000615843 C14orf178Q8N769 122 aaPredicted RBP15.31■□□□□ 0.04
SPAST-203ENST00000615843 LTBRP36941 435 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 ZNF876PQ49A33 203 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 PRSS57Q6UWY2 283 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 HAPLN4Q86UW8 402 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 IGFL4Q6B9Z1 124 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 RCHY1Q96PM5 261 aa15.31■□□□□ 0.04
SPAST-203ENST00000615843 WNT2P09544 360 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 B3GALT5-AS1P59052 145 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 FAM104BQ5XKR9 115 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 RNF5Q99942 180 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 A0A1W2PPM0 123 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 SLC25A20O43772 301 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 GHRHP01286 108 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 LGALS1P09382 135 aaKnown RBP15.3■□□□□ 0.04
SPAST-203ENST00000615843 RNASE6Q93091 150 aaKnown RBP15.3■□□□□ 0.04
SPAST-203ENST00000615843 CDKN1BP46527 198 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 COA6Q5JTJ3 125 aaKnown RBP15.3■□□□□ 0.04
SPAST-203ENST00000615843 TRAV8-3A0A0A6YYJ7 113 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 SPACA3Q8IXA5 215 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 GAFA1Q96PS6 74 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 SIGLEC9Q9Y336 463 aa15.3■□□□□ 0.04
SPAST-203ENST00000615843 HIST1H4AP62805 103 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms