RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 DEFB131AP59861 70 aa12.32□□□□□ -0.44
IRF1-211ENST00000613424 C10orf113Q5VZT2 155 aa12.32□□□□□ -0.44
IRF1-211ENST00000613424 Q6ZNX1 250 aa12.32□□□□□ -0.44
IRF1-211ENST00000613424 OR1L4Q8NGR5 311 aa12.32□□□□□ -0.44
IRF1-211ENST00000613424 GPR82Q96P67 336 aa12.32□□□□□ -0.44
IRF1-211ENST00000613424 RSG1Q9BU20 258 aa12.32□□□□□ -0.44
IRF1-211ENST00000613424 FXYD6-FXYD2A0A087WZ82 144 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 IFNA5P01569 189 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
IRF1-211ENST00000613424 HAGHQ16775 308 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 ZNF709Q8N972 641 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
IRF1-211ENST00000613424 SCGB1C1Q8TD33 95 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 C17orf77Q96MU5 243 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 TNFSF18Q9UNG2 199 aa12.31□□□□□ -0.44
IRF1-211ENST00000613424 LOC102724200A0A096LPH7 203 aaPredicted RBP12.3□□□□□ -0.44
IRF1-211ENST00000613424 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
IRF1-211ENST00000613424 PFDN5Q99471 154 aa12.3□□□□□ -0.44
IRF1-211ENST00000613424 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
IRF1-211ENST00000613424 SEPSECSQ9HD40 501 aaKnown RBP12.3□□□□□ -0.44
IRF1-211ENST00000613424 RNF24Q9Y225 148 aa12.3□□□□□ -0.44
IRF1-211ENST00000613424 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 RNF222A6NCQ9 220 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 C17orf112F2Z3M2 114 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 SOCS3O14543 225 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 RPL7P18124 248 aaKnown RBP12.29□□□□□ -0.44
IRF1-211ENST00000613424 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
IRF1-211ENST00000613424 GCSAMLQ5JQS6 135 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 MORN5Q5VZ52 161 aa12.29□□□□□ -0.44
IRF1-211ENST00000613424 TRAV5A0A0B4J249 113 aa12.28□□□□□ -0.44
IRF1-211ENST00000613424 MRPS12O15235 138 aaKnown RBP12.28□□□□□ -0.44
IRF1-211ENST00000613424 ID1P41134 155 aa12.28□□□□□ -0.44
IRF1-211ENST00000613424 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.28□□□□□ -0.44
IRF1-211ENST00000613424 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
IRF1-211ENST00000613424 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
IRF1-211ENST00000613424 ATF4P18848 351 aaPredicted RBP12.27□□□□□ -0.45
IRF1-211ENST00000613424 MEOX2P50222 304 aa12.27□□□□□ -0.45
IRF1-211ENST00000613424 C16orf92Q96LL3 132 aa12.27□□□□□ -0.45
IRF1-211ENST00000613424 TM2D3Q9BRN9 247 aa12.27□□□□□ -0.45
IRF1-211ENST00000613424 KCNIP2Q9NS61 270 aa12.27□□□□□ -0.45
IRF1-211ENST00000613424 RFNGQ9Y644 331 aa12.27□□□□□ -0.45
IRF1-211ENST00000613424 KNCNA6PVL3 124 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 ISLRO14498 428 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 PSMB3P49720 205 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 ZNF266Q14584 549 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 SAMD13Q5VXD3 122 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 BPIFA4PQ86YQ2 179 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 LINC00052Q96N35 136 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 ZMAT4Q9H898 229 aa12.26□□□□□ -0.45
IRF1-211ENST00000613424 A0A087X0K7 114 aa12.25□□□□□ -0.45
IRF1-211ENST00000613424 ARPC5O15511 151 aa12.25□□□□□ -0.45
IRF1-211ENST00000613424 FFAR4Q5NUL3 377 aa12.25□□□□□ -0.45
IRF1-211ENST00000613424 FAM78BQ5VT40 261 aa12.25□□□□□ -0.45
IRF1-211ENST00000613424 STHQ8IWL8 128 aa12.25□□□□□ -0.45
IRF1-211ENST00000613424 OR11H4Q8NGC9 324 aa12.25□□□□□ -0.45
IRF1-211ENST00000613424 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
IRF1-211ENST00000613424 APOC4P55056 127 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 ACTL10Q5JWF8 245 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 SPATA31B1PQ5VZV4 182 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 IGFL4Q6B9Z1 124 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 ST6GAL2Q96JF0 529 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 C20orf173Q96LM9 149 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 MFFQ9GZY8 342 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 TIMM9Q9Y5J7 89 aa12.24□□□□□ -0.45
IRF1-211ENST00000613424 AGRNO00468 2067 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 TRAV8-2A0A0B4J237 113 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 KIR2DL5BA0A0G2JN68 375 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 KIR2DL5BA0A0G2JPC4 375 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 DEFB1P60022 68 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 RPL7L1Q6DKI1 246 aaKnown RBP12.23□□□□□ -0.45
IRF1-211ENST00000613424 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 KIR2DL5AQ8N109 375 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 HSD17B11Q8NBQ5 300 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 LRRC20Q8TCA0 184 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 U3KQK5 164 aa12.23□□□□□ -0.45
IRF1-211ENST00000613424 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 HMSDA8MTL9 139 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 H3BQ15 152 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 UBE2CO00762 179 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 IGLC2P0DOY2 106 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
IRF1-211ENST00000613424 SLC25A2Q9BXI2 301 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 HRH4Q9H3N8 390 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
IRF1-211ENST00000613424 BORCS7-ASMTA0A0B4J1R7 106 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 H3BTX0 84 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 TAAR5O14804 337 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 RNF182Q8N6D2 247 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 RCHY1Q96PM5 261 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 MRPL32Q9BYC8 188 aaKnown RBP12.21□□□□□ -0.45
IRF1-211ENST00000613424 RETNQ9HD89 108 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 RPRMQ9NS64 109 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms