RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SLC25A39Q9BZJ4 359 aaPredicted RBP9.05□□□□□ -0.96
CBWD3-208ENST00000612050 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
CBWD3-208ENST00000612050 UQCC1Q9NVA1 299 aa9.05□□□□□ -0.96
CBWD3-208ENST00000612050 ELOA3CA0A087WX78 387 aaPredicted RBP9.04□□□□□ -0.96
CBWD3-208ENST00000612050 AGPAT2O15120 278 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 CCNKO75909 580 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 CST7O76096 145 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 HLA-DRB4P13762 266 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 MIFP14174 115 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 SULT1A1P50225 295 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 PLP1P60201 277 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 BAXQ07812 192 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 RAB32Q13637 225 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 ATP6V1FQ16864 119 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 NRARPQ7Z6K4 114 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 OR4B1Q8NGF8 309 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 SHANK2-AS3Q9BTD1 123 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 ARV1Q9H2C2 271 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 SLC25A32Q9H2D1 315 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
CBWD3-208ENST00000612050 LYRM2Q9NU23 88 aaPredicted RBP9.04□□□□□ -0.96
CBWD3-208ENST00000612050 HLA-DRB4X5D2U9 266 aa9.04□□□□□ -0.96
CBWD3-208ENST00000612050 STAB2Q8WWQ8 2551 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
CBWD3-208ENST00000612050 TENM3Q9P273 2699 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 H3BMM0 161 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 H3BRN7 92 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 CAMLGP49069 296 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 OR1L4Q8NGR5 311 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 PFDN5Q99471 154 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 SCRT1Q9BWW7 348 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 NMES1Q9C002 83 aa9.03□□□□□ -0.96
CBWD3-208ENST00000612050 SAV1Q9H4B6 383 aaPredicted RBP9.03□□□□□ -0.96
CBWD3-208ENST00000612050 FAM24AA6NFZ4 105 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 E5RGE8 158 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 MPDU1O75352 247 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 DUSP14O95147 198 aaKnown RBP9.02□□□□□ -0.97
CBWD3-208ENST00000612050 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 BPIFA4PQ86YQ2 179 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 MARVELD1Q9BSK0 173 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 PPP1R14DQ9NXH3 145 aa9.02□□□□□ -0.97
CBWD3-208ENST00000612050 UBE2L5PA0A1B0GUS4 154 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 IGKV3-20P01619 116 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 LRRC37A5PQ49AS3 106 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
CBWD3-208ENST00000612050 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 TMEM252Q8N6L7 170 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 KCNIP2Q9NS61 270 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 XCL2Q9UBD3 114 aa9.01□□□□□ -0.97
CBWD3-208ENST00000612050 LCE6AA0A183 80 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 AMBPP02760 352 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 CXCL2P19875 107 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 C4BPBP20851 252 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 PSG9Q00887 426 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 LCN15Q6UWW0 184 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 ZNF709Q8N972 641 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 ZNF738Q8NE65 137 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 CLUHP3Q96NS8 147 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 UHRF2Q96PU4 802 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 SLC50A1Q9BRV3 221 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 GOLT1BQ9Y3E0 138 aa9□□□□□ -0.97
CBWD3-208ENST00000612050 SOCS3O14543 225 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 FGF7P21781 194 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 IFITM3Q01628 133 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 ARL16Q0P5N6 197 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 CEMP1Q6PRD7 247 aaPredicted RBP8.99□□□□□ -0.97
CBWD3-208ENST00000612050 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 MGST2Q99735 147 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 TMEM208Q9BTX3 173 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 DNAJC4Q9NNZ3 241 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 CLEC5AQ9NY25 188 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 WDR83OSQ9Y284 106 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 NBEAL2Q6ZNJ1 2754 aa8.99□□□□□ -0.97
CBWD3-208ENST00000612050 A0A087X0K7 114 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 A0A0J9YX75 114 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 IGSF23A1L1A6 192 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 TMEM189A5PLL7 270 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 SMIM9A6NGZ8 99 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 ZNF705EA8MWA4 302 aaPredicted RBP8.98□□□□□ -0.97
CBWD3-208ENST00000612050 C17orf112F2Z3M2 114 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 SIX6O95475 246 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 RPL29P47914 159 aaKnown RBP8.98□□□□□ -0.97
CBWD3-208ENST00000612050 B2MP61769 119 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 FAM78BQ5VT40 261 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 PHLDA1Q8WV24 401 aaPredicted RBP8.98□□□□□ -0.97
CBWD3-208ENST00000612050 AGRNO00468 2067 aa8.98□□□□□ -0.97
CBWD3-208ENST00000612050 IGHV3OR16-12A0A075B7B8 117 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 C11orf94C9JXX5 98 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 PTTG1O95997 202 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 RHOBP62745 196 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 IL15RAQ13261 267 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 GUK1Q16774 197 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 VWC2Q2TAL6 325 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 OR5C1Q8NGR4 320 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 HRH4Q9H3N8 390 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 SLC39A9Q9NUM3 307 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 TEX48A0A1B0GUV7 120 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 DEFB4AO15263 64 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms