RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 THAP8Q8NA92 274 aa9.42□□□□□ -0.9
HMGB1P24-201ENST00000611897 MRPS26Q9BYN8 205 aaKnown RBP9.42□□□□□ -0.9
HMGB1P24-201ENST00000611897 PPP1R14DQ9NXH3 145 aa9.42□□□□□ -0.9
HMGB1P24-201ENST00000611897 MED6O75586 246 aa9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 DUSP14O95147 198 aaKnown RBP9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 FAUP35544 74 aaKnown RBP9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 SPANXN5Q5MJ07 72 aa9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 TMEM182Q6ZP80 229 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 ACOT7LQ6ZUV0 252 aa9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 RSL24D1Q9UHA3 163 aaKnown RBP9.41□□□□□ -0.9
HMGB1P24-201ENST00000611897 LYRM9A8MSI8 78 aa9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 BOLA2-SMG1P6H3BVE0 249 aa9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 SYNGR2O43760 224 aa9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 HOXB5P09067 269 aa9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 C17orf77Q96MU5 243 aa9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 CIB3Q96Q77 187 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 RABL2AQ9UBK7 228 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.9
HMGB1P24-201ENST00000611897 TRAV8-2A0A0B4J237 113 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 DUXBA0A1W2PPF3 345 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 FABP12A6NFH5 140 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 CRXO43186 299 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 NOL3O60936 208 aaKnown RBP9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 PITX3O75364 302 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 OR5G3P0C626 314 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 AZU1P20160 251 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 ALDH3B2P48448 385 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 RAP2BP61225 183 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 CLINT1Q14677 625 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 TMEM128Q5BJH2 165 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 C6orf223Q8N319 242 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 DYNC2LI1Q8TCX1 351 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 GPR82Q96P67 336 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 LINC01587Q99440 93 aa9.39□□□□□ -0.91
HMGB1P24-201ENST00000611897 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 A8MTW9 85 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 H3BRN7 92 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 IL5P05113 134 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 ATP5G1P05496 136 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 S100A7P31151 101 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 TNFSF8P32971 234 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 ATP5G3P48201 142 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 CCL18P55774 89 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 FAM3BP58499 235 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 PPP1R1AQ13522 171 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 PYDC2Q56P42 97 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 MAPKAPK5-AS1Q8N8E1 139 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 MCFD2Q8NI22 146 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 RAB2BQ8WUD1 216 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 SLC45A2Q9UMX9 530 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 HIGD1AQ9Y241 93 aa9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 STRAPQ9Y3F4 350 aaKnown RBP9.38□□□□□ -0.91
HMGB1P24-201ENST00000611897 PRSS46E5RG02 174 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 LINC00869P0C866 280 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 RPL7P18124 248 aaKnown RBP9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 CYP2G1PQ6ZSU1 146 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 TOMM5Q8N4H5 51 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 OR4D5Q8NGN0 318 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 ZNRF2Q8NHG8 242 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
HMGB1P24-201ENST00000611897 SFT2D2O95562 160 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 SNRPCP09234 159 aaKnown RBP9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 TSPOP30536 169 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 AP3S2P59780 193 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 B2MP61769 119 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 HSPG2P98160 4391 aa9.36□□□□□ -0.91
HMGB1P24-201ENST00000611897 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 SSSCA1O60232 199 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 HYPMO75409 117 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 SLC25A6P12236 298 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 CXCL3P19876 107 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 POLR2GP62487 172 aaKnown RBP eCLIP9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 OR5I1Q13606 314 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 TRIM63Q969Q1 353 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 SLIRPQ9GZT3 109 aaKnown RBP9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 NOP10Q9NPE3 64 aaKnown RBP9.35□□□□□ -0.91
HMGB1P24-201ENST00000611897 J3KRW8 73 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 ADAP1O75689 374 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 CCNKO75909 580 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 TAS2R60P59551 318 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 PSG3Q16557 428 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
HMGB1P24-201ENST00000611897 RPUSD4Q96CM3 377 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms