RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 FNDC4Q9H6D8 234 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF355PQ9NSJ1 428 aa6.84□□□□□ -1.31
SMAD4-217ENST00000611848 TECRQ9NZ01 308 aaKnown RBP6.84□□□□□ -1.31
SMAD4-217ENST00000611848 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
SMAD4-217ENST00000611848 IGLC7A0M8Q6 106 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 NDUFB4O95168 129 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 S100A6P06703 90 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 CRYGCP07315 174 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 KIAA0141Q14154 515 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-217ENST00000611848 FAM78BQ5VT40 261 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 C8orf86Q6ZUL3 223 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 MIR17HGQ75NE6 70 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 LINC01551Q86U37 167 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
SMAD4-217ENST00000611848 OR5T1Q8NG75 326 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 C11orf52Q96A22 123 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 SRSF8Q9BRL6 282 aaKnown RBP6.83□□□□□ -1.32
SMAD4-217ENST00000611848 TMEM167BQ9NRX6 74 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 IGKV1D-37A0A075B6S9 117 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 A0A0G2JLM5 398 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 NPIPB5A8MRT5 1133 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 TEX22C9J3V5 150 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 PHOX2AO14813 284 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 TRGV3P03979 118 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 APELAP0DMC3 54 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 MYCNOSP40205 109 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
SMAD4-217ENST00000611848 TPPP2P59282 170 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 C18orf65Q6ZTR6 163 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 ZNF503Q96F45 646 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 MS4A10Q96PG2 267 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 RNF2Q99496 336 aa6.83□□□□□ -1.32
SMAD4-217ENST00000611848 MRPL32Q9BYC8 188 aaKnown RBP6.83□□□□□ -1.32
SMAD4-217ENST00000611848 H7BYZ3 331 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 GHRHP01286 108 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 C8orf88P0DMB2 117 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 GATA2P23769 480 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-217ENST00000611848 GALR1P47211 349 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 AKR1D1P51857 326 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 TAS2R45P59539 299 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 FABP9Q0Z7S8 132 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 ETFRF1Q6IPR1 90 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 PQLC2Q6ZP29 291 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 TMEM37Q8WXS4 190 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 ACY3Q96HD9 319 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 USMG5Q96IX5 58 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 DERL1Q9BUN8 251 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 DNAJC4Q9NNZ3 241 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
SMAD4-217ENST00000611848 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 ZNF98A6NK75 572 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 CCL24O00175 119 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 GGCTO75223 188 aaKnown RBP6.81□□□□□ -1.32
SMAD4-217ENST00000611848 MFAP2P55001 183 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 SELENOTP62341 195 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 WFDC9Q8NEX5 89 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 OR11H1Q8NG94 326 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 OR1P1Q8NH06 330 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 NPIPB3Q92617 1050 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 RAX2Q96IS3 184 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 UHRF2Q96PU4 802 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 OR5B12Q96R08 314 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 SRD5A3Q9H8P0 318 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 GNB4Q9HAV0 340 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 MRPL36Q9P0J6 103 aaKnown RBP6.81□□□□□ -1.32
SMAD4-217ENST00000611848 LY96Q9Y6Y9 160 aa6.81□□□□□ -1.32
SMAD4-217ENST00000611848 TRBV9A0A0B4J1U6 114 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 C9JCJ5 164 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 CORTO00230 105 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 PPP1R2P9O14990 202 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 TRGC2P03986 189 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 S100A8P05109 93 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 REG1AP05451 166 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 LGALS1P09382 135 aaKnown RBP6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H1BP16401 226 aaKnown RBP6.8□□□□□ -1.32
SMAD4-217ENST00000611848 CD33P20138 364 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HOXA5P20719 270 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 S100PP25815 95 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 NOTCH1P46531 2555 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 KLK9Q2XQG4 91 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-217ENST00000611848 PATE2Q6UY27 113 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 NECAP1Q8NC96 275 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 TMEM116Q8NCL8 245 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 OR1L4Q8NGR5 311 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 OR1N2Q8NGR9 330 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms