RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 DOK5Q9P104 306 aa14.01□□□□□ -0.17
TCF3-219ENST00000610756 PLECQ15149 4684 aaKnown RBP14.01□□□□□ -0.17
TCF3-219ENST00000610756 DNAH1Q9P2D7 4330 aa14□□□□□ -0.17
TCF3-219ENST00000610756 FAM24AA6NFZ4 105 aa14□□□□□ -0.17
TCF3-219ENST00000610756 AGPAT2O15120 278 aa14□□□□□ -0.17
TCF3-219ENST00000610756 PRAF2O60831 178 aa14□□□□□ -0.17
TCF3-219ENST00000610756 JTBO76095 146 aa14□□□□□ -0.17
TCF3-219ENST00000610756 OR5G3P0C626 314 aa14□□□□□ -0.17
TCF3-219ENST00000610756 MIFP14174 115 aa14□□□□□ -0.17
TCF3-219ENST00000610756 SLC38A11Q08AI6 406 aa14□□□□□ -0.17
TCF3-219ENST00000610756 RAB32Q13637 225 aa14□□□□□ -0.17
TCF3-219ENST00000610756 PATE2Q6UY27 113 aa14□□□□□ -0.17
TCF3-219ENST00000610756 C11orf45Q8TAV5 145 aa14□□□□□ -0.17
TCF3-219ENST00000610756 MARVELD1Q9BSK0 173 aa14□□□□□ -0.17
TCF3-219ENST00000610756 RPRMQ9NS64 109 aa14□□□□□ -0.17
TCF3-219ENST00000610756 LYRM2Q9NU23 88 aaPredicted RBP14□□□□□ -0.17
TCF3-219ENST00000610756 CLEC5AQ9NY25 188 aa14□□□□□ -0.17
TCF3-219ENST00000610756 RNF24Q9Y225 148 aa14□□□□□ -0.17
TCF3-219ENST00000610756 INMT-MINDY4F8WBC2 141 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 CST7O76096 145 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 RPL7P18124 248 aaKnown RBP13.99□□□□□ -0.17
TCF3-219ENST00000610756 DEFB1P60022 68 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 ZNF546Q86UE3 836 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 MFFQ9GZY8 342 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 X6R8D5 127 aa13.99□□□□□ -0.17
TCF3-219ENST00000610756 DEFB4AO15263 64 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 RBMY1A1P0DJD3 496 aaKnown RBP13.98□□□□□ -0.17
TCF3-219ENST00000610756 RBMY1CP0DJD4 496 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 S100A11P31949 105 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 SULT1A1P50225 295 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 S100A10P60903 97 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 RAB31Q13636 194 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 RBMY1FQ15415 496 aaKnown RBP13.98□□□□□ -0.17
TCF3-219ENST00000610756 EBLN2Q6P2I7 272 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 TMEM252Q8N6L7 170 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 PHLDA1Q8WV24 401 aaPredicted RBP13.98□□□□□ -0.17
TCF3-219ENST00000610756 UHRF2Q96PU4 802 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 MGST2Q99735 147 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 ARV1Q9H2C2 271 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 XCL2Q9UBD3 114 aa13.98□□□□□ -0.17
TCF3-219ENST00000610756 IGHV4-28A0A0C4DH34 117 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 A0A0J9YX75 114 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 DEFA1P59665 94 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 DEFA3P59666 94 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 VWC2Q2TAL6 325 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 C20orf173Q96LM9 149 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 HRH4Q9H3N8 390 aa13.97□□□□□ -0.17
TCF3-219ENST00000610756 KLK5Q9Y337 293 aaPredicted RBP13.97□□□□□ -0.17
TCF3-219ENST00000610756 ELOA3CA0A087WX78 387 aaPredicted RBP13.96□□□□□ -0.17
TCF3-219ENST00000610756 IGKV3-20P01619 116 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 CAMLGP49069 296 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 NANOS2P60321 138 aaKnown RBP13.96□□□□□ -0.17
TCF3-219ENST00000610756 FAM78BQ5VT40 261 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 OR4B1Q8NGF8 309 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 NMES1Q9C002 83 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 UQCC1Q9NVA1 299 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 WDR83OSQ9Y284 106 aa13.96□□□□□ -0.17
TCF3-219ENST00000610756 TRAV8-2A0A0B4J237 113 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 IGSF23A1L1A6 192 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 F6UB75 175 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 HBG1P69891 147 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 HBG2P69892 147 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 CYCSP99999 105 aaKnown RBP13.95□□□□□ -0.18
TCF3-219ENST00000610756 PSG9Q00887 426 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 ATP6V1FQ16864 119 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 LINC00305Q7Z4B0 112 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 STX12Q86Y82 276 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 ZNF709Q8N972 641 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 CHAC2Q8WUX2 184 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 TMEM37Q8WXS4 190 aa13.95□□□□□ -0.18
TCF3-219ENST00000610756 A0A087X0K7 114 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 A8MTW9 85 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 SIX6O95475 246 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 RLN2P04090 185 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 FGL1Q08830 312 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 ZNF705AQ6ZN79 300 aaPredicted RBP13.94□□□□□ -0.18
TCF3-219ENST00000610756 Q6ZRG5 221 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 NEU1Q99519 415 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 DNAJC4Q9NNZ3 241 aa13.94□□□□□ -0.18
TCF3-219ENST00000610756 MRPS12O15235 138 aaKnown RBP13.93□□□□□ -0.18
TCF3-219ENST00000610756 PRR20EP86478 221 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 PRR20CP86479 221 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 PRR20DP86480 221 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 PRR20BP86481 221 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 PRR20AP86496 221 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 IGFL4Q6B9Z1 124 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 HYDINQ4G0P3 5121 aa13.93□□□□□ -0.18
TCF3-219ENST00000610756 ZNF705FA8MVS1 300 aaPredicted RBP13.92□□□□□ -0.18
TCF3-219ENST00000610756 COX7A2P2O60397 106 aa13.92□□□□□ -0.18
TCF3-219ENST00000610756 ZNF705DP0CH99 300 aaPredicted RBP13.92□□□□□ -0.18
TCF3-219ENST00000610756 ZNF705BP0CI00 300 aaPredicted RBP13.92□□□□□ -0.18
TCF3-219ENST00000610756 RPL29P47914 159 aaKnown RBP13.92□□□□□ -0.18
TCF3-219ENST00000610756 C10orf113Q5VZT2 155 aa13.92□□□□□ -0.18
TCF3-219ENST00000610756 SLC35B3Q9H1N7 401 aa13.92□□□□□ -0.18
TCF3-219ENST00000610756 SMIM9A6NGZ8 99 aa13.91□□□□□ -0.18
TCF3-219ENST00000610756 E5RGE8 158 aa13.91□□□□□ -0.18
TCF3-219ENST00000610756 DUSP14O95147 198 aaKnown RBP13.91□□□□□ -0.18
TCF3-219ENST00000610756 CXCL3P19876 107 aa13.91□□□□□ -0.18
TCF3-219ENST00000610756 FXYD7P58549 80 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms