RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 H3BRN7 92 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 AGPAT2O15120 278 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 LINC00869P0C866 280 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
CD9-212ENST00000610354 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
CD9-212ENST00000610354 TEPPQ6URK8 271 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 TMEM217Q8N7C4 229 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 SCRT1Q9BWW7 348 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 NMES1Q9C002 83 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
CD9-212ENST00000610354 FBXL17Q9UF56 701 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 TP53TG1Q9Y2A0 90 aa9.33□□□□□ -0.92
CD9-212ENST00000610354 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
CD9-212ENST00000610354 SULT1A1P50225 295 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 SELENOTP62341 195 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 VWC2Q2TAL6 325 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 ZNF767PQ75MW2 155 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 OR8I2Q8N0Y5 310 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 SHANK2-AS3Q9BTD1 123 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 RNF126Q9BV68 326 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 TMEM147Q9BVK8 224 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 SLC25A39Q9BZJ4 359 aaPredicted RBP9.32□□□□□ -0.92
CD9-212ENST00000610354 SLC25A22Q9H936 323 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 WDR83OSQ9Y284 106 aa9.32□□□□□ -0.92
CD9-212ENST00000610354 PLECQ15149 4684 aaKnown RBP9.32□□□□□ -0.92
CD9-212ENST00000610354 HYPMO75409 117 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 C4BPBP20851 252 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 NHLH2Q02577 135 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 FCN2Q15485 313 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 Q5BKY6 102 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 GDF5OSQ5U4N7 250 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 ZFAND6Q6FIF0 208 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 STHQ8IWL8 128 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 HIGD1AQ9Y241 93 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 RYR3Q15413 4870 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 DNAH1Q9P2D7 4330 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 MRPS12O15235 138 aaKnown RBP9.31□□□□□ -0.92
CD9-212ENST00000610354 SSNA1O43805 119 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 CA1P00915 261 aaPredicted RBP9.31□□□□□ -0.92
CD9-212ENST00000610354 OR5G3P0C626 314 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 LYL1P12980 280 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 LRRC37A5PQ49AS3 106 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 TMEM37Q8WXS4 190 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 UQCC1Q9NVA1 299 aa9.31□□□□□ -0.92
CD9-212ENST00000610354 TENM2Q9NT68 2774 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 TRAV8-2A0A0B4J237 113 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 E5RGE8 158 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 H3BMM0 161 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 J3QL48 77 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 S100A11P31949 105 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
CD9-212ENST00000610354 MIC13Q5XKP0 118 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 IGFL4Q6B9Z1 124 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 ZNF546Q86UE3 836 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 C9orf62Q8N4C0 152 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 PPP1R1CQ8WVI7 109 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 ARV1Q9H2C2 271 aa9.3□□□□□ -0.92
CD9-212ENST00000610354 UBE2L5PA0A1B0GUS4 154 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 F6UB75 175 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 MPC2O95563 127 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 CXCL3P19876 107 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 GALR1P47211 349 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 CAMLGP49069 296 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 PSMB3P49720 205 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 RAP2BP61225 183 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 CYCSP99999 105 aaKnown RBP9.29□□□□□ -0.92
CD9-212ENST00000610354 CSNK1G2-AS1Q8NCQ2 148 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 OR11H7Q8NGC8 314 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 GATAD1Q8WUU5 269 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
CD9-212ENST00000610354 ISLRO14498 428 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 RLN2P04090 185 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 SPP1P10451 314 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 HLA-DRB4P13762 266 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 ID1P41134 155 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 OPCMLQ14982 345 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 ATP6V1FQ16864 119 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 MORN3Q6PF18 240 aaPredicted RBP9.28□□□□□ -0.92
CD9-212ENST00000610354 STX12Q86Y82 276 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 GPR82Q96P67 336 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 SAV1Q9H4B6 383 aaPredicted RBP9.28□□□□□ -0.92
CD9-212ENST00000610354 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 HSPB11Q9Y547 144 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 HLA-DRB4X5D2U9 266 aa9.28□□□□□ -0.92
CD9-212ENST00000610354 RYR2Q92736 4967 aa9.27□□□□□ -0.93
CD9-212ENST00000610354 A0A087X0K7 114 aa9.27□□□□□ -0.93
CD9-212ENST00000610354 FGF7P21781 194 aa9.27□□□□□ -0.93
CD9-212ENST00000610354 HLA-DMBP28068 263 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms