RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 VWC2Q2TAL6 325 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 Q6ZRG5 221 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 Q6ZWC4 215 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 THAP6Q8TBB0 222 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 C16orf92Q96LL3 132 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 GPR82Q96P67 336 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
USE1-209ENST00000601592 PSMB3P49720 205 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 MEOX2P50222 304 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 PXDC1Q5TGL8 231 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 C10orf113Q5VZT2 155 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 LINC00305Q7Z4B0 112 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 RNF126Q9BV68 326 aa9.42□□□□□ -0.9
USE1-209ENST00000601592 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
USE1-209ENST00000601592 ISLRO14498 428 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 DEFB1P60022 68 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 B2MP61769 119 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 OPCMLQ14982 345 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 SAMD13Q5VXD3 122 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
USE1-209ENST00000601592 OR11H7Q8NGC8 314 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 OR1L4Q8NGR5 311 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 MUC7Q8TAX7 377 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 SMIM3Q9BZL3 60 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 EDA2RQ9HAV5 297 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 SLC39A9Q9NUM3 307 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 HSPB11Q9Y547 144 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
USE1-209ENST00000601592 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
USE1-209ENST00000601592 SOCS3O14543 225 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 MPDU1O75352 247 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 RPL12P30050 165 aaKnown RBP9.4□□□□□ -0.9
USE1-209ENST00000601592 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 ZNF709Q8N972 641 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 LRRC20Q8TCA0 184 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 TMEM37Q8WXS4 190 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 RNF183Q96D59 192 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 PFDN5Q99471 154 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 NPCDR1Q9BY65 106 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
USE1-209ENST00000601592 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
USE1-209ENST00000601592 SPP1P10451 314 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
USE1-209ENST00000601592 PRR20EP86478 221 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 PRR20CP86479 221 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 PRR20DP86480 221 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 PRR20BP86481 221 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 PRR20AP86496 221 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 GDF5OSQ5U4N7 250 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 MORN5Q5VZ52 161 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
USE1-209ENST00000601592 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 ATP5SQ99766 215 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 RPRMQ9NS64 109 aa9.39□□□□□ -0.91
USE1-209ENST00000601592 F6UB75 175 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 H3BMM0 161 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 LYL1P12980 280 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 C4BPBP20851 252 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 FOXI2Q6ZQN5 318 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 BPIFA4PQ86YQ2 179 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 RNF182Q8N6D2 247 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 ZNF738Q8NE65 137 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 WDR61Q9GZS3 305 aaKnown RBP9.38□□□□□ -0.91
USE1-209ENST00000601592 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
USE1-209ENST00000601592 KCNIP2Q9NS61 270 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
USE1-209ENST00000601592 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 H3BTX0 84 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 IFNA5P01569 189 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 GIPP09681 153 aaPredicted RBP9.37□□□□□ -0.91
USE1-209ENST00000601592 FXYD7P58549 80 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 NUTF2P61970 127 aaKnown RBP9.37□□□□□ -0.91
USE1-209ENST00000601592 OXA1LQ15070 435 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 SCGB1C1Q8TD33 95 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 GATAD1Q8WUU5 269 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 RARRES2Q99969 163 aa9.37□□□□□ -0.91
USE1-209ENST00000601592 A0A087X0K7 114 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 TMEM41BQ5BJD5 291 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 LCN15Q6UWW0 184 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
USE1-209ENST00000601592 TRAV8-2A0A0B4J237 113 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms