RNA–Protein interactions for RNA: ENST00000601333.1

ECH1-215, Transcript of enoyl-CoA hydratase 1, human

TSL 2

Gene ECH1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECH1-215	ENST00000601333	WDR61	Q9GZS3	305 aa	Known RBP	10.88	□□□□□ -0.67
ECH1-215	ENST00000601333	NRN1	Q9NPD7	142 aa		10.88	□□□□□ -0.67
ECH1-215	ENST00000601333	SLC39A9	Q9NUM3	307 aa		10.88	□□□□□ -0.67
ECH1-215	ENST00000601333	FBXL17	Q9UF56	701 aa		10.88	□□□□□ -0.67
ECH1-215	ENST00000601333	RNF222	A6NCQ9	220 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	CFD	P00746	253 aa	Predicted RBP	10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	PET100	P0DJ07	73 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	RAP2B	P61225	183 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	B2M	P61769	119 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	PAFAH1B2	P68402	229 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	GDF5OS	Q5U4N7	250 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	LINC00305	Q7Z4B0	112 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	TM2D3	Q9BRN9	247 aa		10.87	□□□□□ -0.67
ECH1-215	ENST00000601333	FXYD6-FXYD2	A0A087WZ82	144 aa		10.86	□□□□□ -0.67
ECH1-215	ENST00000601333	TRAV2	A0A0B4J234	112 aa		10.86	□□□□□ -0.67
ECH1-215	ENST00000601333	TRAV8-2	A0A0B4J237	113 aa		10.86	□□□□□ -0.67
ECH1-215	ENST00000601333	COX7A2P2	O60397	106 aa		10.86	□□□□□ -0.67
ECH1-215	ENST00000601333	RPL29	P47914	159 aa	Known RBP	10.86	□□□□□ -0.67
ECH1-215	ENST00000601333	C1orf194	Q5T5A4	169 aa		10.86	□□□□□ -0.67
ECH1-215	ENST00000601333	hCG_2014768	A0A024R1R8	64 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.85	□□□□□ -0.67
ECH1-215	ENST00000601333		F6UB75	175 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	CD5	P06127	495 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	C10orf113	Q5VZT2	155 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333		Q6ZNX1	250 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	RNF182	Q8N6D2	247 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	OR11H4	Q8NGC9	324 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	LINC00052	Q96N35	136 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	AQP10	Q96PS8	301 aa		10.85	□□□□□ -0.67
ECH1-215	ENST00000601333	STAB2	Q8WWQ8	2551 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333		A0A1B0GVG6	124 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333		H3BQ15	152 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	GIG44	P09565	113 aa	Predicted RBP	10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	AP2S1	P53680	142 aa	Predicted RBP	10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	FGL1	Q08830	312 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	ACTL10	Q5JWF8	245 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	RCHY1	Q96PM5	261 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	DNAJC4	Q9NNZ3	241 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	TNFSF18	Q9UNG2	199 aa		10.84	□□□□□ -0.67
ECH1-215	ENST00000601333	SLC17A3	O00476	420 aa		10.83	□□□□□ -0.68
ECH1-215	ENST00000601333	RAB31	Q13636	194 aa		10.83	□□□□□ -0.68
ECH1-215	ENST00000601333	MIR17HG	Q75NE6	70 aa		10.83	□□□□□ -0.68
ECH1-215	ENST00000601333	SEPSECS	Q9HD40	501 aa	Known RBP	10.83	□□□□□ -0.68
ECH1-215	ENST00000601333		U3KQK5	164 aa		10.83	□□□□□ -0.68
ECH1-215	ENST00000601333	IGKV3-20	P01619	116 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	ZNF705D	P0CH99	300 aa	Predicted RBP	10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	ZNF705B	P0CI00	300 aa	Predicted RBP	10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	PYY	P10082	97 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	C4BPB	P20851	252 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	NUP62	P37198	522 aa	Predicted RBP	10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	GALR1	P47211	349 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	CD300C	Q08708	224 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	DEFB135	Q30KP9	77 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	TRPT1	Q86TN4	253 aa	Known RBP	10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	FAM167A-AS1	Q96KT0	104 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	SH3BGRL3	Q9H299	93 aa		10.82	□□□□□ -0.68
ECH1-215	ENST00000601333	ARPC5	O15511	151 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	MPDU1	O75352	247 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	NHLRC4	P0CG21	123 aa	Predicted RBP	10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	IGLC2	P0DOY2	106 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	FXYD7	P58549	80 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	FFAR4	Q5NUL3	377 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	PXDC1	Q5TGL8	231 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	RPL7L1	Q6DKI1	246 aa	Known RBP	10.81	□□□□□ -0.68
ECH1-215	ENST00000601333		Q6ZRG5	221 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	HSD17B11	Q8NBQ5	300 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	ST6GAL2	Q96JF0	529 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	C16orf92	Q96LL3	132 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	OVOL2	Q9BRP0	275 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	SLC25A2	Q9BXI2	301 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	PFDN2	Q9UHV9	154 aa		10.81	□□□□□ -0.68
ECH1-215	ENST00000601333	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	RPL7	P18124	248 aa	Known RBP	10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	ATF4	P18848	351 aa	Predicted RBP	10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	PSMB3	P49720	205 aa		10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	RAB2A	P61019	212 aa		10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	FAM78B	Q5VT40	261 aa		10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	ZNF503	Q96F45	646 aa		10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	ZNF586	Q9NXT0	402 aa		10.8	□□□□□ -0.68
ECH1-215	ENST00000601333	CLEC5A	Q9NY25	188 aa		10.8	□□□□□ -0.68
ECH1-215	ENST00000601333		A0A087X0K7	114 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.79	□□□□□ -0.68
ECH1-215	ENST00000601333		H3BMM0	161 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	IFNA5	P01569	189 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	SNRPD3	P62318	126 aa	Known RBP	10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	OR1L4	Q8NGR5	311 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	SCGB1C1	Q8TD33	95 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	ASB13	Q8WXK3	278 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	SPATA25	Q9BR10	227 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	CYTL1	Q9NRR1	136 aa		10.79	□□□□□ -0.68
ECH1-215	ENST00000601333	DNAH7	Q8WXX0	4024 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	PRAC2	D3DTV9	90 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	ISLR	O14498	428 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	CA1	P00915	261 aa	Predicted RBP	10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	CXCL2	P19875	107 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	ATP6V0C	P27449	155 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	CMC4	P56277	68 aa	Predicted RBP	10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	STH	Q8IWL8	128 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	ZNF709	Q8N972	641 aa		10.78	□□□□□ -0.68
ECH1-215	ENST00000601333	GATAD1	Q8WUU5	269 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms