RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 SLC35E1Q96K37 410 aa7.7□□□□□ -1.18
VRK3-214ENST00000598553 NRN1Q9NPD7 142 aa7.7□□□□□ -1.18
VRK3-214ENST00000598553 KMT2AQ03164 3969 aa7.7□□□□□ -1.18
VRK3-214ENST00000598553 H3BMM0 161 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 ARPC5O15511 151 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 IGKV3-20P01619 116 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 SNRPD3P62318 126 aaKnown RBP7.69□□□□□ -1.18
VRK3-214ENST00000598553 ZNF345Q14585 488 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 OR8G2PQ6IF36 304 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 ACOT7LQ6ZUV0 252 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 COMMD7Q86VX2 200 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 CCDC28AQ8IWP9 274 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 THAP8Q8NA92 274 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 TRGV9Q99603 122 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 MFFQ9GZY8 342 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 ARL6Q9H0F7 186 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 SLC25A32Q9H2D1 315 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 SEPSECSQ9HD40 501 aaKnown RBP7.69□□□□□ -1.18
VRK3-214ENST00000598553 XCL2Q9UBD3 114 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 TMED3Q9Y3Q3 217 aa7.69□□□□□ -1.18
VRK3-214ENST00000598553 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 SYNGR2O43760 224 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 MED6O75586 246 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 SIX6O95475 246 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 PAX9P55771 341 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 RAB11AP62491 216 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 SPANXN5Q5MJ07 72 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 IGFL4Q6B9Z1 124 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 Q6ZTC4 211 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 ZNF546Q86UE3 836 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 OR4D5Q8NGN0 318 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 COQ8AQ8NI60 647 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 THAP6Q8TBB0 222 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 CIB3Q96Q77 187 aaPredicted RBP7.68□□□□□ -1.18
VRK3-214ENST00000598553 SLC35B3Q9H1N7 401 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 PFDN2Q9UHV9 154 aa7.68□□□□□ -1.18
VRK3-214ENST00000598553 KANTRA0A1W2PQU2 76 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 CCSO14618 274 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 FABP1P07148 127 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 HLA-DRB4P13762 266 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 M6PRP20645 277 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 HLA-DMBP28068 263 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 KCNRGQ8N5I3 272 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 ZNF709Q8N972 641 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 PHYHIPLQ96FC7 376 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 NMES1Q9C002 83 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 DOK5Q9P104 306 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 APLNQ9ULZ1 77 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 HLA-DRB4X5D2U9 266 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
VRK3-214ENST00000598553 SSSCA1O60232 199 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 CFDP00746 253 aaPredicted RBP7.66□□□□□ -1.18
VRK3-214ENST00000598553 PRM2P04554 102 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 MIFP14174 115 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 NKX2-1P43699 371 aaPredicted RBP7.66□□□□□ -1.18
VRK3-214ENST00000598553 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
VRK3-214ENST00000598553 ID3Q02535 119 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 C12orf74Q32Q52 190 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 C1orf194Q5T5A4 169 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 INO80EQ8NBZ0 244 aaPredicted RBP7.66□□□□□ -1.18
VRK3-214ENST00000598553 LINC00052Q96N35 136 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 HRH4Q9H3N8 390 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 PLA2G2EQ9NZK7 142 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 TNFSF18Q9UNG2 199 aa7.66□□□□□ -1.18
VRK3-214ENST00000598553 RCL1Q9Y2P8 373 aaKnown RBP7.66□□□□□ -1.18
VRK3-214ENST00000598553 TRAV8-2A0A0B4J237 113 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 BCL2L11O43521 198 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 ZNF705DP0CH99 300 aaPredicted RBP7.65□□□□□ -1.18
VRK3-214ENST00000598553 ZNF705BP0CI00 300 aaPredicted RBP7.65□□□□□ -1.18
VRK3-214ENST00000598553 PET100P0DJ07 73 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
VRK3-214ENST00000598553 TOR2AQ5JU69 321 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 LRRC20Q8TCA0 184 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 C1QTNF4Q9BXJ3 329 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 SAV1Q9H4B6 383 aaPredicted RBP7.65□□□□□ -1.18
VRK3-214ENST00000598553 SLC25A22Q9H936 323 aa7.65□□□□□ -1.18
VRK3-214ENST00000598553 DNAH6Q9C0G6 4158 aa7.65□□□□□ -1.19
VRK3-214ENST00000598553 NACAE9PAV3 2078 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 DNAH10Q8IVF4 4471 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 C5orf51A6NDU8 294 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 ZNF98A6NK75 572 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 FAM25EA8MYX2 175 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 IGLL5B9A064 214 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 KRBOX1C9JBD0 128 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 H3BRN7 92 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 SCGB1D2O95969 90 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 METTL15P1P0C7V9 234 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 ORM2P19652 201 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 PSMB3P49720 205 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 AKR1C1Q04828 323 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 LGALS9CQ6DKI2 356 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 ZNF705AQ6ZN79 300 aaPredicted RBP7.64□□□□□ -1.19
VRK3-214ENST00000598553 C1orf158Q8N1D5 194 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 EIF4E3Q8N5X7 224 aaKnown RBP7.64□□□□□ -1.19
VRK3-214ENST00000598553 RNF182Q8N6D2 247 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 OR1B1Q8NGR6 318 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 C2CD4CQ8TF44 421 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 PPP1R1CQ8WVI7 109 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms