RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 LOC102724200A0A096LPH7 203 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 ZNF124Q15973 351 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 HAGHQ16775 308 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 C10orf113Q5VZT2 155 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 LINC00305Q7Z4B0 112 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 PFDN5Q99471 154 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 KCNIP2Q9NS61 270 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 FXYD6-FXYD2A0A087WZ82 144 aa14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 RPL7P18124 248 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 SNRPD3P62318 126 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 LINC00322Q6ZN03 302 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 SCGB1C1Q8TD33 95 aa14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 RSG1Q9BU20 258 aa14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 ZMAT4Q9H898 229 aa14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 DNAJC4Q9NNZ3 241 aa14.58□□□□□ -0.08
SHKBP1-214ENST00000597396 C17orf112F2Z3M2 114 aa14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 ATF4P18848 351 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 ID1P41134 155 aa14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 MEOX2P50222 304 aa14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 PSMG4Q5JS54 123 aa14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 INO80EQ8NBZ0 244 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 TMEM37Q8WXS4 190 aa14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 AQP10Q96PS8 301 aa14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 SEPSECSQ9HD40 501 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-214ENST00000597396 RPL35AP18077 110 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-214ENST00000597396 DNAH9Q9NYC9 4486 aa14.55□□□□□ -0.08
SHKBP1-214ENST00000597396 SAMD13Q5VXD3 122 aa14.55□□□□□ -0.08
SHKBP1-214ENST00000597396 SPATA25Q9BR10 227 aa14.55□□□□□ -0.08
SHKBP1-214ENST00000597396 TM2D3Q9BRN9 247 aa14.55□□□□□ -0.08
SHKBP1-214ENST00000597396 WFDC1Q9HC57 220 aa14.55□□□□□ -0.08
SHKBP1-214ENST00000597396 PSMB3P49720 205 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 APOC4P55056 127 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 STHQ8IWL8 128 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 GATAD1Q8WUU5 269 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 C16orf92Q96LL3 132 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 LINC00052Q96N35 136 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 U3KQK5 164 aa14.54□□□□□ -0.08
SHKBP1-214ENST00000597396 ISLRO14498 428 aa14.53□□□□□ -0.08
SHKBP1-214ENST00000597396 ZNF266Q14584 549 aa14.53□□□□□ -0.08
SHKBP1-214ENST00000597396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.53□□□□□ -0.08
SHKBP1-214ENST00000597396 BPIFA4PQ86YQ2 179 aa14.53□□□□□ -0.08
SHKBP1-214ENST00000597396 PARD6GQ9BYG4 376 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-214ENST00000597396 TNFSF18Q9UNG2 199 aa14.53□□□□□ -0.08
SHKBP1-214ENST00000597396 COL7A1Q02388 2944 aa14.52□□□□□ -0.08
SHKBP1-214ENST00000597396 KNCNA6PVL3 124 aa14.52□□□□□ -0.09
SHKBP1-214ENST00000597396 G3V3Q6 166 aa14.52□□□□□ -0.09
SHKBP1-214ENST00000597396 SMLR1H3BR10 107 aa14.52□□□□□ -0.09
SHKBP1-214ENST00000597396 SOCS3O14543 225 aa14.52□□□□□ -0.09
SHKBP1-214ENST00000597396 MORN5Q5VZ52 161 aa14.52□□□□□ -0.09
SHKBP1-214ENST00000597396 RNF222A6NCQ9 220 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 GCSAMLQ5JQS6 135 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 ACTL10Q5JWF8 245 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 FFAR4Q5NUL3 377 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 Q6ZNX1 250 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 LRRC20Q8TCA0 184 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 RCHY1Q96PM5 261 aa14.51□□□□□ -0.09
SHKBP1-214ENST00000597396 A0A087X0K7 114 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 TRAV5A0A0B4J249 113 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 KIR2DL5BA0A0G2JN68 375 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 KIR2DL5BA0A0G2JPC4 375 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 MRPS12O15235 138 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 ARPC5O15511 151 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 FAM78BQ5VT40 261 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 KIR2DL5AQ8N109 375 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 KIR2DL5BQ8NHK3 375 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 C17orf77Q96MU5 243 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 RETNQ9HD89 108 aa14.5□□□□□ -0.09
SHKBP1-214ENST00000597396 NBEAL2Q6ZNJ1 2754 aa14.49□□□□□ -0.09
SHKBP1-214ENST00000597396 UBE2CO00762 179 aa14.49□□□□□ -0.09
SHKBP1-214ENST00000597396 CSTL1Q9H114 145 aa14.49□□□□□ -0.09
SHKBP1-214ENST00000597396 RPRMQ9NS64 109 aa14.49□□□□□ -0.09
SHKBP1-214ENST00000597396 LCN15Q6UWW0 184 aa14.48□□□□□ -0.09
SHKBP1-214ENST00000597396 TRPT1Q86TN4 253 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-214ENST00000597396 HSD17B11Q8NBQ5 300 aa14.48□□□□□ -0.09
SHKBP1-214ENST00000597396 MRPL32Q9BYC8 188 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-214ENST00000597396 TIMM9Q9Y5J7 89 aa14.48□□□□□ -0.09
SHKBP1-214ENST00000597396 BORCS7-ASMTA0A0B4J1R7 106 aa14.47□□□□□ -0.09
SHKBP1-214ENST00000597396 SNRPCP09234 159 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-214ENST00000597396 SPATA31B1PQ5VZV4 182 aa14.47□□□□□ -0.09
SHKBP1-214ENST00000597396 IGFL4Q6B9Z1 124 aa14.47□□□□□ -0.09
SHKBP1-214ENST00000597396 C20orf173Q96LM9 149 aa14.47□□□□□ -0.09
SHKBP1-214ENST00000597396 MFFQ9GZY8 342 aa14.47□□□□□ -0.09
SHKBP1-214ENST00000597396 CXCL2P19875 107 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 DEFB1P60022 68 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 DEFB135Q30KP9 77 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 ACOT6Q3I5F7 207 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 EBLN2Q6P2I7 272 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 FOXI2Q6ZQN5 318 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 MIR17HGQ75NE6 70 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 RNF182Q8N6D2 247 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 SLC50A1Q9BRV3 221 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 SAV1Q9H4B6 383 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 FUT9Q9Y231 359 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 RFNGQ9Y644 331 aa14.46□□□□□ -0.09
SHKBP1-214ENST00000597396 hCG_2014768A0A024R1R8 64 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 TRAV8-2A0A0B4J237 113 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 H3BTX0 84 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 CA1P00915 261 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 HLA-DRB4P13762 266 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms