RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 APOC4P55056 127 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 PATE2Q6UY27 113 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 KIR2DL5BQ8NHK3 375 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 RNF183Q96D59 192 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 UHRF2Q96PU4 802 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 SLC25A31Q9H0C2 315 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 SLC25A22Q9H936 323 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 NRN1Q9NPD7 142 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 PFDN2Q9UHV9 154 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 AGRNO00468 2067 aa11.69□□□□□ -0.54
USHBP1-206ENST00000596436 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 HYPMO75409 117 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 OR5G3P0C626 314 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 PET100P0DJ07 73 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 CAMLGP49069 296 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
USHBP1-206ENST00000596436 DEFB135Q30KP9 77 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 OR8I2Q8N0Y5 310 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 SLC25A39Q9BZJ4 359 aaPredicted RBP11.68□□□□□ -0.54
USHBP1-206ENST00000596436 ARL6Q9H0F7 186 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 FBXL17Q9UF56 701 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 HIGD1AQ9Y241 93 aa11.68□□□□□ -0.54
USHBP1-206ENST00000596436 SOCS3O14543 225 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
USHBP1-206ENST00000596436 FGF7P21781 194 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 PRR20EP86478 221 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 PRR20CP86479 221 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 PRR20DP86480 221 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 PRR20BP86481 221 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 PRR20AP86496 221 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 BAXQ07812 192 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 CLINT1Q14677 625 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 ATP6V1FQ16864 119 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 MIC13Q5XKP0 118 aa11.67□□□□□ -0.54
USHBP1-206ENST00000596436 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
USHBP1-206ENST00000596436 KLK5Q9Y337 293 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-206ENST00000596436 RAP2BP61225 183 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 OPCMLQ14982 345 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 LGALS9CQ6DKI2 356 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 THAP6Q8TBB0 222 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 HSPB11Q9Y547 144 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 KIAA1109Q2LD37 5005 aa11.66□□□□□ -0.54
USHBP1-206ENST00000596436 KNCNA6PVL3 124 aa11.65□□□□□ -0.54
USHBP1-206ENST00000596436 RPL12P30050 165 aaKnown RBP11.65□□□□□ -0.54
USHBP1-206ENST00000596436 Q5BKY6 102 aa11.65□□□□□ -0.54
USHBP1-206ENST00000596436 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
USHBP1-206ENST00000596436 MORN5Q5VZ52 161 aa11.65□□□□□ -0.54
USHBP1-206ENST00000596436 CHAC2Q8WUX2 184 aa11.65□□□□□ -0.54
USHBP1-206ENST00000596436 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
USHBP1-206ENST00000596436 GIPP09681 153 aaPredicted RBP11.64□□□□□ -0.55
USHBP1-206ENST00000596436 RPL29P47914 159 aaKnown RBP11.64□□□□□ -0.55
USHBP1-206ENST00000596436 RAB31Q13636 194 aa11.64□□□□□ -0.55
USHBP1-206ENST00000596436 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
USHBP1-206ENST00000596436 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.64□□□□□ -0.55
USHBP1-206ENST00000596436 NPCDR1Q9BY65 106 aa11.64□□□□□ -0.55
USHBP1-206ENST00000596436 SLC39A9Q9NUM3 307 aa11.64□□□□□ -0.55
USHBP1-206ENST00000596436 MRPS12O15235 138 aaKnown RBP11.63□□□□□ -0.55
USHBP1-206ENST00000596436 COX7A2P2O60397 106 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 MPDU1O75352 247 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 GALR1P47211 349 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 DEFB1P60022 68 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 B2MP61769 119 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
USHBP1-206ENST00000596436 GPR82Q96P67 336 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 ATP5SQ99766 215 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 SMIM3Q9BZL3 60 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
USHBP1-206ENST00000596436 SEPSECSQ9HD40 501 aaKnown RBP11.63□□□□□ -0.55
USHBP1-206ENST00000596436 PXMP4Q9Y6I8 212 aa11.63□□□□□ -0.55
USHBP1-206ENST00000596436 S100A7P31151 101 aa11.62□□□□□ -0.55
USHBP1-206ENST00000596436 SNRPD3P62318 126 aaKnown RBP11.62□□□□□ -0.55
USHBP1-206ENST00000596436 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
USHBP1-206ENST00000596436 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
USHBP1-206ENST00000596436 TRPT1Q86TN4 253 aaKnown RBP11.62□□□□□ -0.55
USHBP1-206ENST00000596436 WFDC1Q9HC57 220 aa11.62□□□□□ -0.55
USHBP1-206ENST00000596436 ELOA3CA0A087WX78 387 aaPredicted RBP11.61□□□□□ -0.55
USHBP1-206ENST00000596436 G3V3Q6 166 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 RPL7P18124 248 aaKnown RBP11.61□□□□□ -0.55
USHBP1-206ENST00000596436 PSMB3P49720 205 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 Q6ZRG5 221 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 ASB13Q8WXK3 278 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 C20orf173Q96LM9 149 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 DNAJC4Q9NNZ3 241 aa11.61□□□□□ -0.55
USHBP1-206ENST00000596436 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 TRAV5A0A0B4J249 113 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 ISLRO14498 428 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 MEOX2P50222 304 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 GDF5OSQ5U4N7 250 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 STHQ8IWL8 128 aa11.6□□□□□ -0.55
USHBP1-206ENST00000596436 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms