RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
LIG1-208ENST00000595758 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
LIG1-208ENST00000595758 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
LIG1-208ENST00000595758 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
LIG1-208ENST00000595758 ZNF688P0C7X2 276 aa10.66□□□□□ -0.7
LIG1-208ENST00000595758 NHLRC4P0CG21 123 aaPredicted RBP10.66□□□□□ -0.7
LIG1-208ENST00000595758 DEFB131AP59861 70 aa10.66□□□□□ -0.7
LIG1-208ENST00000595758 LINC00322Q6ZN03 302 aaPredicted RBP10.66□□□□□ -0.7
LIG1-208ENST00000595758 LINC00305Q7Z4B0 112 aa10.66□□□□□ -0.7
LIG1-208ENST00000595758 CITED4Q96RK1 184 aa10.66□□□□□ -0.7
LIG1-208ENST00000595758 RSG1Q9BU20 258 aa10.66□□□□□ -0.7
LIG1-208ENST00000595758 KCNIP2Q9NS61 270 aa10.66□□□□□ -0.7
LIG1-208ENST00000595758 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
LIG1-208ENST00000595758 G3V3Q6 166 aa10.65□□□□□ -0.7
LIG1-208ENST00000595758 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
LIG1-208ENST00000595758 SNRPD3P62318 126 aaKnown RBP10.65□□□□□ -0.7
LIG1-208ENST00000595758 HAGHQ16775 308 aa10.65□□□□□ -0.7
LIG1-208ENST00000595758 PFDN5Q99471 154 aa10.65□□□□□ -0.7
LIG1-208ENST00000595758 SEPSECSQ9HD40 501 aaKnown RBP10.65□□□□□ -0.7
LIG1-208ENST00000595758 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.7
LIG1-208ENST00000595758 LOC102724200A0A096LPH7 203 aaPredicted RBP10.64□□□□□ -0.71
LIG1-208ENST00000595758 SMLR1H3BR10 107 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 ATF4P18848 351 aaPredicted RBP10.64□□□□□ -0.71
LIG1-208ENST00000595758 ID1P41134 155 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 MEOX2P50222 304 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 ZNF124Q15973 351 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 PSMG4Q5JS54 123 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 GATAD1Q8WUU5 269 aa10.64□□□□□ -0.71
LIG1-208ENST00000595758 PARD6GQ9BYG4 376 aaPredicted RBP10.64□□□□□ -0.71
LIG1-208ENST00000595758 GCSAMLQ5JQS6 135 aa10.63□□□□□ -0.71
LIG1-208ENST00000595758 RNF222A6NCQ9 220 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 ISLRO14498 428 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 SOCS3O14543 225 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 RPL35AP18077 110 aaKnown RBP10.62□□□□□ -0.71
LIG1-208ENST00000595758 PSMB3P49720 205 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 ZNF266Q14584 549 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 BPIFA4PQ86YQ2 179 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 C17orf77Q96MU5 243 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 DNAH9Q9NYC9 4486 aa10.62□□□□□ -0.71
LIG1-208ENST00000595758 TRAV5A0A0B4J249 113 aa10.61□□□□□ -0.71
LIG1-208ENST00000595758 ARPC5O15511 151 aa10.61□□□□□ -0.71
LIG1-208ENST00000595758 FFAR4Q5NUL3 377 aa10.61□□□□□ -0.71
LIG1-208ENST00000595758 MFFQ9GZY8 342 aa10.61□□□□□ -0.71
LIG1-208ENST00000595758 ZMAT4Q9H898 229 aa10.61□□□□□ -0.71
LIG1-208ENST00000595758 A0A087X0K7 114 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 MRPS12O15235 138 aaKnown RBP10.6□□□□□ -0.71
LIG1-208ENST00000595758 APOC4P55056 127 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 ACTL10Q5JWF8 245 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 FAM78BQ5VT40 261 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 STHQ8IWL8 128 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 TIMM9Q9Y5J7 89 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
LIG1-208ENST00000595758 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 hCG_2014768A0A024R1R8 64 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 BORCS7-ASMTA0A0B4J1R7 106 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 KIR2DL5BA0A0G2JN68 375 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 KIR2DL5BA0A0G2JPC4 375 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 KIR2DL5AQ8N109 375 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 HSD17B11Q8NBQ5 300 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 LRRC20Q8TCA0 184 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 ST6GAL2Q96JF0 529 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 SPATA25Q9BR10 227 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 RFNGQ9Y644 331 aa10.59□□□□□ -0.71
LIG1-208ENST00000595758 TRAV8-2A0A0B4J237 113 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 HMSDA8MTL9 139 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 UBE2CO00762 179 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 SNRPCP09234 159 aaKnown RBP10.58□□□□□ -0.72
LIG1-208ENST00000595758 SPATA31B1PQ5VZV4 182 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 RPL7L1Q6DKI1 246 aaKnown RBP10.58□□□□□ -0.72
LIG1-208ENST00000595758 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 OR11H4Q8NGC9 324 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 C20orf173Q96LM9 149 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
LIG1-208ENST00000595758 CSTL1Q9H114 145 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 HRH4Q9H3N8 390 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 TMEM14CQ9P0S9 112 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 U3KQK5 164 aa10.58□□□□□ -0.72
LIG1-208ENST00000595758 H3BQ15 152 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 TAAR5O14804 337 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 IGLC2P0DOY2 106 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 CXCL2P19875 107 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 ACOT6Q3I5F7 207 aaPredicted RBP10.57□□□□□ -0.72
LIG1-208ENST00000595758 IGFL4Q6B9Z1 124 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 LCN15Q6UWW0 184 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
LIG1-208ENST00000595758 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 PSMG3Q9BT73 122 aaPredicted RBP10.57□□□□□ -0.72
LIG1-208ENST00000595758 RPRMQ9NS64 109 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 FUT9Q9Y231 359 aa10.57□□□□□ -0.72
LIG1-208ENST00000595758 H3BMM0 161 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 H3BTX0 84 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms