RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 U3KQK5 164 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 DNAH9Q9NYC9 4486 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 KIR2DL5BA0A0G2JN68 375 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 KIR2DL5BA0A0G2JPC4 375 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 ID1P41134 155 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 APOC4P55056 127 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 B2MP61769 119 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 MIC13Q5XKP0 118 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 KIR2DL5AQ8N109 375 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 KIR2DL5BQ8NHK3 375 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 SCRT1Q9BWW7 348 aa19.08■□□□□ 0.64
TRIM28-204ENST00000594806 ZNF688P0C7X2 276 aa19.07■□□□□ 0.64
TRIM28-204ENST00000594806 C10orf113Q5VZT2 155 aa19.07■□□□□ 0.64
TRIM28-204ENST00000594806 LINC00305Q7Z4B0 112 aa19.07■□□□□ 0.64
TRIM28-204ENST00000594806 WDR61Q9GZS3 305 aaKnown RBP19.07■□□□□ 0.64
TRIM28-204ENST00000594806 PXMP4Q9Y6I8 212 aa19.07■□□□□ 0.64
TRIM28-204ENST00000594806 UBE2CO00762 179 aa19.06■□□□□ 0.64
TRIM28-204ENST00000594806 PSMB3P49720 205 aa19.06■□□□□ 0.64
TRIM28-204ENST00000594806 ZNF709Q8N972 641 aa19.06■□□□□ 0.64
TRIM28-204ENST00000594806 TMEM37Q8WXS4 190 aa19.06■□□□□ 0.64
TRIM28-204ENST00000594806 UHRF2Q96PU4 802 aa19.06■□□□□ 0.64
TRIM28-204ENST00000594806 C17orf112F2Z3M2 114 aa19.05■□□□□ 0.64
TRIM28-204ENST00000594806 ISLRO14498 428 aa19.05■□□□□ 0.64
TRIM28-204ENST00000594806 IFNA5P01569 189 aa19.05■□□□□ 0.64
TRIM28-204ENST00000594806 GATAD1Q8WUU5 269 aa19.05■□□□□ 0.64
TRIM28-204ENST00000594806 AQP10Q96PS8 301 aa19.05■□□□□ 0.64
TRIM28-204ENST00000594806 RSG1Q9BU20 258 aa19.05■□□□□ 0.64
TRIM28-204ENST00000594806 PARD6GQ9BYG4 376 aaPredicted RBP19.05■□□□□ 0.64
TRIM28-204ENST00000594806 LEMD1Q68G75 181 aa19.04■□□□□ 0.64
TRIM28-204ENST00000594806 OR2T35Q8NGX2 323 aa19.04■□□□□ 0.64
TRIM28-204ENST00000594806 SCGB1C1Q8TD33 95 aa19.04■□□□□ 0.64
TRIM28-204ENST00000594806 SOCS3O14543 225 aa19.03■□□□□ 0.64
TRIM28-204ENST00000594806 ATF4P18848 351 aaPredicted RBP19.03■□□□□ 0.64
TRIM28-204ENST00000594806 ZNF124Q15973 351 aa19.03■□□□□ 0.64
TRIM28-204ENST00000594806 PSMG4Q5JS54 123 aa19.03■□□□□ 0.64
TRIM28-204ENST00000594806 RCHY1Q96PM5 261 aa19.03■□□□□ 0.64
TRIM28-204ENST00000594806 BPIFA4PQ86YQ2 179 aa19.02■□□□□ 0.64
TRIM28-204ENST00000594806 STHQ8IWL8 128 aa19.02■□□□□ 0.64
TRIM28-204ENST00000594806 INO80EQ8NBZ0 244 aaPredicted RBP19.02■□□□□ 0.64
TRIM28-204ENST00000594806 COL7A1Q02388 2944 aa19.01■□□□□ 0.63
TRIM28-204ENST00000594806 A0A087X0K7 114 aa19.01■□□□□ 0.63
TRIM28-204ENST00000594806 RPL35AP18077 110 aaKnown RBP19.01■□□□□ 0.63
TRIM28-204ENST00000594806 Q5BKY6 102 aa19.01■□□□□ 0.63
TRIM28-204ENST00000594806 Q6ZWC4 215 aa19.01■□□□□ 0.63
TRIM28-204ENST00000594806 C16orf92Q96LL3 132 aa19.01■□□□□ 0.63
TRIM28-204ENST00000594806 SMIM3Q9BZL3 60 aa19.01■□□□□ 0.63
TRIM28-204ENST00000594806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19■□□□□ 0.63
TRIM28-204ENST00000594806 CSTL1Q9H114 145 aa19■□□□□ 0.63
TRIM28-204ENST00000594806 ZNF266Q14584 549 aa18.99■□□□□ 0.63
TRIM28-204ENST00000594806 C17orf77Q96MU5 243 aa18.99■□□□□ 0.63
TRIM28-204ENST00000594806 TP53TG1Q9Y2A0 90 aa18.99■□□□□ 0.63
TRIM28-204ENST00000594806 AGRNO00468 2067 aa18.99■□□□□ 0.63
TRIM28-204ENST00000594806 MRPS12O15235 138 aaKnown RBP18.98■□□□□ 0.63
TRIM28-204ENST00000594806 CXCL2P19875 107 aa18.98■□□□□ 0.63
TRIM28-204ENST00000594806 SPATA31B1PQ5VZV4 182 aa18.98■□□□□ 0.63
TRIM28-204ENST00000594806 LINC00052Q96N35 136 aa18.98■□□□□ 0.63
TRIM28-204ENST00000594806 FXYD6-FXYD2A0A087WZ82 144 aa18.97■□□□□ 0.63
TRIM28-204ENST00000594806 ACTL10Q5JWF8 245 aa18.97■□□□□ 0.63
TRIM28-204ENST00000594806 MORN3Q6PF18 240 aaPredicted RBP18.97■□□□□ 0.63
TRIM28-204ENST00000594806 TRPT1Q86TN4 253 aaKnown RBP18.97■□□□□ 0.63
TRIM28-204ENST00000594806 WFDC1Q9HC57 220 aa18.97■□□□□ 0.63
TRIM28-204ENST00000594806 RPRMQ9NS64 109 aa18.97■□□□□ 0.63
TRIM28-204ENST00000594806 TNFSF18Q9UNG2 199 aa18.97■□□□□ 0.63
TRIM28-204ENST00000594806 KNCNA6PVL3 124 aa18.96■□□□□ 0.63
TRIM28-204ENST00000594806 SPP1P10451 314 aa18.96■□□□□ 0.63
TRIM28-204ENST00000594806 TMEM41BQ5BJD5 291 aa18.96■□□□□ 0.63
TRIM28-204ENST00000594806 LCN15Q6UWW0 184 aa18.96■□□□□ 0.63
TRIM28-204ENST00000594806 FOXI2Q6ZQN5 318 aa18.96■□□□□ 0.63
TRIM28-204ENST00000594806 MORN5Q5VZ52 161 aa18.95■□□□□ 0.62
TRIM28-204ENST00000594806 WWC2-AS2Q96NR7 200 aa18.95■□□□□ 0.62
TRIM28-204ENST00000594806 MRPL32Q9BYC8 188 aaKnown RBP18.95■□□□□ 0.62
TRIM28-204ENST00000594806 HRH4Q9H3N8 390 aa18.95■□□□□ 0.62
TRIM28-204ENST00000594806 TIMM9Q9Y5J7 89 aa18.95■□□□□ 0.62
TRIM28-204ENST00000594806 HLA-DRB4P13762 266 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 GUK1Q16774 197 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 FAM78BQ5VT40 261 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 LRRC20Q8TCA0 184 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 CLUHP3Q96NS8 147 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 SLC50A1Q9BRV3 221 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 SAV1Q9H4B6 383 aaPredicted RBP18.94■□□□□ 0.62
TRIM28-204ENST00000594806 TMEM14CQ9P0S9 112 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 HLA-DRB4X5D2U9 266 aa18.94■□□□□ 0.62
TRIM28-204ENST00000594806 RNF222A6NCQ9 220 aa18.93■□□□□ 0.62
TRIM28-204ENST00000594806 G3V3Q6 166 aa18.93■□□□□ 0.62
TRIM28-204ENST00000594806 H3BMM0 161 aa18.93■□□□□ 0.62
TRIM28-204ENST00000594806 EBLN2Q6P2I7 272 aa18.93■□□□□ 0.62
TRIM28-204ENST00000594806 CLEC5AQ9NY25 188 aa18.93■□□□□ 0.62
TRIM28-204ENST00000594806 SPRY2O43597 315 aa18.92■□□□□ 0.62
TRIM28-204ENST00000594806 IGLC2P0DOY2 106 aa18.92■□□□□ 0.62
TRIM28-204ENST00000594806 NUTF2P61970 127 aaKnown RBP18.92■□□□□ 0.62
TRIM28-204ENST00000594806 FFAR4Q5NUL3 377 aa18.92■□□□□ 0.62
TRIM28-204ENST00000594806 RNF183Q96D59 192 aa18.92■□□□□ 0.62
TRIM28-204ENST00000594806 OVOL2Q9BRP0 275 aa18.92■□□□□ 0.62
TRIM28-204ENST00000594806 HUWE1Q7Z6Z7 4374 aaKnown RBP18.92■□□□□ 0.62
TRIM28-204ENST00000594806 TRAV8-2A0A0B4J237 113 aa18.91■□□□□ 0.62
TRIM28-204ENST00000594806 TRAV5A0A0B4J249 113 aa18.91■□□□□ 0.62
TRIM28-204ENST00000594806 GCSAMLQ5JQS6 135 aa18.91■□□□□ 0.62
TRIM28-204ENST00000594806 Q6ZNX1 250 aa18.91■□□□□ 0.62
TRIM28-204ENST00000594806 RETNQ9HD89 108 aa18.91■□□□□ 0.62
TRIM28-204ENST00000594806 CA1P00915 261 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms