RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 MIR17HGQ75NE6 70 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 RPP25LQ8N5L8 163 aaKnown RBP8.22□□□□□ -1.09
USE1-204ENST00000594399 FAM213BQ8TBF2 198 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 GPR82Q96P67 336 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 MCRIP2Q9BUT9 160 aaKnown RBP8.22□□□□□ -1.09
USE1-204ENST00000594399 ACTR3CQ9C0K3 210 aaPredicted RBP8.22□□□□□ -1.09
USE1-204ENST00000594399 TECRQ9NZ01 308 aaKnown RBP8.22□□□□□ -1.09
USE1-204ENST00000594399 MLXQ9UH92 298 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 CTXND1A0A1B0GTU2 59 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 RPL7P18124 248 aaKnown RBP8.21□□□□□ -1.1
USE1-204ENST00000594399 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 TEX261Q6UWH6 196 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 OR8I2Q8N0Y5 310 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 WFDC9Q8NEX5 89 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 GLMPQ8WWB7 406 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 SLC25A2Q9BXI2 301 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 PLA2G2EQ9NZK7 142 aa8.21□□□□□ -1.1
USE1-204ENST00000594399 TRAV5A0A0B4J249 113 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 HELTA6NFD8 242 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 OR7C2O60412 319 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 IFNA7P01567 189 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 CD5P06127 495 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 GALR1P47211 349 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 FHITP49789 147 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 INSL3P51460 131 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 ZNF726P1Q15940 193 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 SSX7Q7RTT5 188 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 TCF24Q7RTU0 167 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 STXBP6Q8NFX7 210 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 RNF141Q8WVD5 230 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 RAB24Q969Q5 203 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 TMEM14CQ9P0S9 112 aa8.2□□□□□ -1.1
USE1-204ENST00000594399 NOTCH1P46531 2555 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 VWFP04275 2813 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 CMYA5Q8N3K9 4069 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 MAP1LC3B2A6NCE7 125 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 ZNF705EA8MWA4 302 aaPredicted RBP8.19□□□□□ -1.1
USE1-204ENST00000594399 HMGB3O15347 200 aaKnown RBP8.19□□□□□ -1.1
USE1-204ENST00000594399 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
USE1-204ENST00000594399 IGLV1-51P01701 117 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 STAG3L2P0CL84 134 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 STAG3L3P0CL85 134 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 GP9P14770 177 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 ATF4P18848 351 aaPredicted RBP8.19□□□□□ -1.1
USE1-204ENST00000594399 DEFB114Q30KQ6 69 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 PQLC2Q6ZP29 291 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 ZNF680Q8NEM1 530 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 OR2K2Q8NGT1 345 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 MAP1LC3BQ9GZQ8 125 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 UBQLN2Q9UHD9 624 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 SELENOKQ9Y6D0 94 aa8.19□□□□□ -1.1
USE1-204ENST00000594399 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
USE1-204ENST00000594399 CXorf1O96002 111 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 H2AFB1P0C5Y9 115 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 ARL14EPLP0DKL9 152 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 PYYP10082 97 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 IGLL1P15814 213 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 RPL11P62913 178 aaKnown RBP8.18□□□□□ -1.1
USE1-204ENST00000594399 UBE2L3P68036 154 aaKnown RBP8.18□□□□□ -1.1
USE1-204ENST00000594399 CD300EQ496F6 205 aaPredicted RBP8.18□□□□□ -1.1
USE1-204ENST00000594399 FAM90A2PQ658T7 463 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 LCN12Q6JVE5 192 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 LCN15Q6UWW0 184 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 RBPMS2Q6ZRY4 209 aaKnown RBP8.18□□□□□ -1.1
USE1-204ENST00000594399 TMEM61Q8N0U2 210 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 PAXXQ9BUH6 204 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 OR51M1Q9H341 326 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 MEGF8Q7Z7M0 2845 aa8.18□□□□□ -1.1
USE1-204ENST00000594399 IGKV3-7A0A075B6H7 116 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 A0A087X0K7 114 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 TRAV25A0A0B4J276 109 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 TSPAN4O14817 238 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 OR10J4P0C629 311 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 ZNF767PQ75MW2 155 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 SFT2D1Q8WV19 159 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 SAT2Q96F10 170 aaPredicted RBP8.17□□□□□ -1.1
USE1-204ENST00000594399 ZNF503Q96F45 646 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
USE1-204ENST00000594399 TEX46H3BTG2 121 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 WIPF1O43516 503 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 HBE1P02100 147 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 HIST1H1EP10412 219 aaKnown RBP8.16□□□□□ -1.1
USE1-204ENST00000594399 GCHFRP30047 84 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 MEOX2P50222 304 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 FGF8P55075 233 aaPredicted RBP8.16□□□□□ -1.1
USE1-204ENST00000594399 PAFAH1B2P68402 229 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 BLOC1S1P78537 153 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 IFITM2Q01629 132 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 GUK1Q16774 197 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 SAMD13Q5VXD3 122 aa8.16□□□□□ -1.1
USE1-204ENST00000594399 FXYD5Q96DB9 178 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms