RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CCL24O00175 119 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 DEFB136Q30KP8 78 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 GBGT1Q8N5D6 347 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 NECAP1Q8NC96 275 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 RAX2Q96IS3 184 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 SRSF8Q9BRL6 282 aaKnown RBP15.19■□□□□ 0.02
LSM4-203ENST00000593829 ELOVL1Q9BW60 279 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 SLC25A22Q9H936 323 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.19■□□□□ 0.02
LSM4-203ENST00000593829 TMEM14BQ9NUH8 114 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 MGAM2Q2M2H8 2515 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 A0A0G2JLM5 398 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 A0A1W2PPQ1 181 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 C15orf61A6NNL5 157 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 AREGP15514 252 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 NUTF2P61970 127 aaKnown RBP15.18■□□□□ 0.02
LSM4-203ENST00000593829 FFAR4Q5NUL3 377 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 OR8G2PQ6IF36 304 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 TMEM144Q7Z5S9 345 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 OR10P1Q8NGE3 313 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 OR5B3Q8NH48 314 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 FUT9Q9Y231 359 aa15.18■□□□□ 0.02
LSM4-203ENST00000593829 C17orf112F2Z3M2 114 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 PDE6DO43924 150 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 CNN1P51911 297 aaKnown RBP15.17■□□□□ 0.02
LSM4-203ENST00000593829 DUX3Q96PT4 197 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 RBMXL2O75526 392 aaKnown RBP15.17■□□□□ 0.02
LSM4-203ENST00000593829 CRYGCP07315 174 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 LGALS1P09382 135 aaKnown RBP15.17■□□□□ 0.02
LSM4-203ENST00000593829 MRPL52Q86TS9 123 aaKnown RBP15.17■□□□□ 0.02
LSM4-203ENST00000593829 MRPL41Q8IXM3 137 aaKnown RBP15.17■□□□□ 0.02
LSM4-203ENST00000593829 USMG5Q96IX5 58 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 TXNDC17Q9BRA2 123 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 HINT2Q9BX68 163 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 NPCDR1Q9BY65 106 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 NDUFA4L2Q9NRX3 87 aa15.17■□□□□ 0.02
LSM4-203ENST00000593829 IGLC7A0M8Q6 106 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 IGHV3-11P01762 117 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 CD33P20138 364 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 ZNF709Q8N972 641 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 WFDC9Q8NEX5 89 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 OR11H1Q8NG94 326 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 TMEM37Q8WXS4 190 aa15.16■□□□□ 0.02
LSM4-203ENST00000593829 ZNF705GA8MUZ8 300 aaPredicted RBP15.15■□□□□ 0.02
LSM4-203ENST00000593829 PAGE4O60829 102 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 REG1AP05451 166 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 LINC00482Q8N8I6 264 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 OR10W1Q8NGF6 305 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 OR1N2Q8NGR9 330 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 TRBV9A0A0B4J1U6 114 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 KIR2DL5BA0A0G2JN68 375 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 KIR2DL5BA0A0G2JPC4 375 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 F6UZH7 168 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 DEFA4P12838 97 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 RHOGP84095 191 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 LINC01551Q86U37 167 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 KIR2DL5AQ8N109 375 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 KCNIP2Q9NS61 270 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 FBN3Q75N90 2809 aa15.15■□□□□ 0.02
LSM4-203ENST00000593829 NBEAL1Q6ZS30 2694 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 FAM223BA6NKX1 122 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 TCAPO15273 167 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 NPPCP23582 126 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 ERVFC1-1P60608 527 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 C1orf194Q5T5A4 169 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 C19orf35Q6ZS72 473 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 FAM223AQ8IWN6 122 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 DTD1Q8TEA8 209 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 GATAD1Q8WUU5 269 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 PXMP4Q9Y6I8 212 aa15.14■□□□□ 0.01
LSM4-203ENST00000593829 C11orf94C9JXX5 98 aa15.13■□□□□ 0.01
LSM4-203ENST00000593829 SNRPCP09234 159 aaKnown RBP15.13■□□□□ 0.01
LSM4-203ENST00000593829 CDC34P49427 236 aaPredicted RBP15.13■□□□□ 0.01
LSM4-203ENST00000593829 HSPE1P61604 102 aaKnown RBP15.13■□□□□ 0.01
LSM4-203ENST00000593829 WT1-ASQ06250 92 aa15.13■□□□□ 0.01
LSM4-203ENST00000593829 FHL3Q13643 280 aa15.13■□□□□ 0.01
LSM4-203ENST00000593829 USF2Q15853 346 aaPredicted RBP15.13■□□□□ 0.01
LSM4-203ENST00000593829 DPF1Q92782 380 aa15.13■□□□□ 0.01
LSM4-203ENST00000593829 ATP5G2Q06055 141 aa15.13■□□□□ 0.01
LSM4-203ENST00000593829 WDR83OSQ9Y284 106 aa15.13■□□□□ 0.01
LSM4-203ENST00000593829 TRAV9-1A0A075B6T8 112 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 OR2J3O76001 311 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 KLK9Q2XQG4 91 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 AARDQ4LEZ3 155 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 FANCD2OSQ96PS1 177 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 KLK9Q9UKQ9 250 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 CMYA5Q8N3K9 4069 aa15.12■□□□□ 0.01
LSM4-203ENST00000593829 HMGB3O15347 200 aaKnown RBP15.11■□□□□ 0.01
LSM4-203ENST00000593829 YPEL3P61236 119 aaPredicted RBP15.11■□□□□ 0.01
LSM4-203ENST00000593829 PRCDQ00LT1 54 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 FBXL7Q9UJT9 491 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 LINC01619G3V211 115 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 EREGO14944 169 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 MPDU1O75352 247 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 OR10J1P30954 320 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 C15orf32Q32M92 178 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 FAM78BQ5VT40 261 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 TRAPPC1Q9Y5R8 145 aa15.11■□□□□ 0.01
LSM4-203ENST00000593829 IGLV11-55A0A075B6I3 123 aa15.1■□□□□ 0.01
LSM4-203ENST00000593829 IGHV4OR15-8A0A075B7B6 117 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms