RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ORM2P19652 201 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 MEOX2P50222 304 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 PPP1R1AQ13522 171 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 ACOT7LQ6ZUV0 252 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 RAB2BQ8WUD1 216 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 SLC25A39Q9BZJ4 359 aaPredicted RBP7.47□□□□□ -1.21
USE1-203ENST00000593597 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
USE1-203ENST00000593597 RSL24D1Q9UHA3 163 aaKnown RBP7.47□□□□□ -1.21
USE1-203ENST00000593597 PAIP2BQ9ULR5 123 aaKnown RBP7.47□□□□□ -1.21
USE1-203ENST00000593597 RABL2BQ9UNT1 228 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 V9GYH0 126 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 FAT1Q14517 4588 aa7.47□□□□□ -1.21
USE1-203ENST00000593597 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
USE1-203ENST00000593597 SYNGR2O43760 224 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 SFT2D2O95562 160 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 FABP1P07148 127 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 VAMP1P23763 118 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 GALR1P47211 349 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 RAB11AP62491 216 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 TMEM128Q5BJH2 165 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 C1orf134Q5TEV5 83 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 GGNBP1Q5YKI7 109 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 OR4D5Q8NGN0 318 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 OR1B1Q8NGR6 318 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 SCGB3A2Q96PL1 93 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 PFDN2Q9UHV9 154 aa7.46□□□□□ -1.22
USE1-203ENST00000593597 FABP12A6NFH5 140 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 LYRM9A8MSI8 78 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 ADAP1O75689 374 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 INSP01308 110 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 HOXB5P09067 269 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 TMBIM6P55061 237 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 KIR3DS1Q14943 382 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 BPIFCQ8NFQ6 507 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 UHRF2Q96PU4 802 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 LINC00588Q9Y4M8 146 aa7.45□□□□□ -1.22
USE1-203ENST00000593597 NBDYA0A0U1RRE5 68 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 BOLA2-SMG1P6H3BVE0 249 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 CXCL3P19876 107 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 TSPOP30536 169 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 POLR2GP62487 172 aaKnown RBP eCLIP7.44□□□□□ -1.22
USE1-203ENST00000593597 SAMD13Q5VXD3 122 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 PATE2Q6UY27 113 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 TMEM144Q7Z5S9 345 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 C15orf53Q8NAA6 179 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 RNF141Q8WVD5 230 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 BCL7BQ9BQE9 202 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 TMEM147Q9BVK8 224 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 PARD6GQ9BYG4 376 aaPredicted RBP7.44□□□□□ -1.22
USE1-203ENST00000593597 TMED3Q9Y3Q3 217 aa7.44□□□□□ -1.22
USE1-203ENST00000593597 A0A087X0K7 114 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 MED6O75586 246 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 DUSP14O95147 198 aaKnown RBP7.43□□□□□ -1.22
USE1-203ENST00000593597 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
USE1-203ENST00000593597 PLP1P60201 277 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 ID3Q02535 119 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 AKR1C1Q04828 323 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 FGL1Q08830 312 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 TOMM5Q8N4H5 51 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 OR8A1Q8NGG7 326 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 MCFD2Q8NI22 146 aa7.43□□□□□ -1.22
USE1-203ENST00000593597 CIB3Q96Q77 187 aaPredicted RBP7.43□□□□□ -1.22
USE1-203ENST00000593597 F5H768 121 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 NUDT3O95989 172 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 LINC00869P0C866 280 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 FAM3BP58499 235 aaPredicted RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 HIST1H1AQ02539 215 aaPredicted RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 ARL16Q0P5N6 197 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 SOHLH1Q5JUK2 328 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 MORN5Q5VZ52 161 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 C6orf223Q8N319 242 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 ZBTB8BQ8NAP8 495 aaPredicted RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 RNASE8Q8TDE3 154 aaKnown RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 GPR82Q96P67 336 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 SLC25A21Q9BQT8 299 aaPredicted RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 FLVCR2Q9UPI3 526 aa7.42□□□□□ -1.22
USE1-203ENST00000593597 STRAPQ9Y3F4 350 aaKnown RBP7.42□□□□□ -1.22
USE1-203ENST00000593597 C9orf170A2RU37 121 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 SMCO3A2RU48 225 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 C16orf90A8MZG2 172 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 PRAC2D3DTV9 90 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 SLC17A3O00476 420 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 CDK2AP2O75956 126 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 FAUP35544 74 aaKnown RBP7.41□□□□□ -1.22
USE1-203ENST00000593597 RRAS2P62070 204 aaPredicted RBP7.41□□□□□ -1.22
USE1-203ENST00000593597 SLC38A11Q08AI6 406 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 PSG3Q16557 428 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 PYDC2Q56P42 97 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 TMEM14EPQ6UXP3 125 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 CCDC190Q86UF4 302 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms