RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PPP1R1CQ8WVI7 109 aa10.21□□□□□ -0.77
CLIP3-205ENST00000592017 C16orf92Q96LL3 132 aa10.21□□□□□ -0.77
CLIP3-205ENST00000592017 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.77
CLIP3-205ENST00000592017 RSG1Q9BU20 258 aa10.21□□□□□ -0.77
CLIP3-205ENST00000592017 ARV1Q9H2C2 271 aa10.21□□□□□ -0.77
CLIP3-205ENST00000592017 ALMS1Q8TCU4 4167 aa10.21□□□□□ -0.78
CLIP3-205ENST00000592017 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
CLIP3-205ENST00000592017 H0YIZ8 118 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 SOCS3O14543 225 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 COX7A2P2O60397 106 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 ATF4P18848 351 aaPredicted RBP10.2□□□□□ -0.78
CLIP3-205ENST00000592017 FGF7P21781 194 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 PSMB3P49720 205 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 MEOX2P50222 304 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 DEFB1P60022 68 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 EWSR1Q01844 656 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLIP3-205ENST00000592017 FGL1Q08830 312 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 S100A7AQ86SG5 101 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 GPR82Q96P67 336 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 SLC25A31Q9H0C2 315 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 SEPSECSQ9HD40 501 aaKnown RBP10.2□□□□□ -0.78
CLIP3-205ENST00000592017 WDR83OSQ9Y284 106 aa10.2□□□□□ -0.78
CLIP3-205ENST00000592017 A0A0J9YWU9 116 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 SPP1P10451 314 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 RPL7P18124 248 aaKnown RBP10.19□□□□□ -0.78
CLIP3-205ENST00000592017 C4BPBP20851 252 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 NHLH2Q02577 135 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 VWC2Q2TAL6 325 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 MIC13Q5XKP0 118 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 PATE2Q6UY27 113 aa10.19□□□□□ -0.78
CLIP3-205ENST00000592017 ISLRO14498 428 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 IGKV3-20P01619 116 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 PET100P0DJ07 73 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 CLINT1Q14677 625 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 ATP6V1FQ16864 119 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 PXDC1Q5TGL8 231 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 SAMD13Q5VXD3 122 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 MORN3Q6PF18 240 aaPredicted RBP10.18□□□□□ -0.78
CLIP3-205ENST00000592017 Q6ZRG5 221 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 OR5C1Q8NGR4 320 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 THAP6Q8TBB0 222 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 GATAD1Q8WUU5 269 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 RARRES2Q99969 163 aa10.18□□□□□ -0.78
CLIP3-205ENST00000592017 F6UB75 175 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 H3BMM0 161 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 MPC2O95563 127 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 B2MP61769 119 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 OPCMLQ14982 345 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 C10orf113Q5VZT2 155 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 IGFL4Q6B9Z1 124 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 C20orf173Q96LM9 149 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 CLEC5AQ9NY25 188 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 MBD2Q9UBB5 411 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
CLIP3-205ENST00000592017 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
CLIP3-205ENST00000592017 PRR20EP86478 221 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 PRR20CP86479 221 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 PRR20DP86480 221 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 PRR20BP86481 221 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 PRR20AP86496 221 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 MORN5Q5VZ52 161 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 EBLN2Q6P2I7 272 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 FOXI2Q6ZQN5 318 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 OR4B1Q8NGF8 309 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 OR1L4Q8NGR5 311 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 LRRC20Q8TCA0 184 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 TMEM37Q8WXS4 190 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 C17orf77Q96MU5 243 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 SAV1Q9H4B6 383 aaPredicted RBP10.16□□□□□ -0.78
CLIP3-205ENST00000592017 RPRMQ9NS64 109 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 SLC39A9Q9NUM3 307 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 RNF24Q9Y225 148 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 PXMP4Q9Y6I8 212 aa10.16□□□□□ -0.78
CLIP3-205ENST00000592017 SNRPCP09234 159 aaKnown RBP10.15□□□□□ -0.78
CLIP3-205ENST00000592017 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
CLIP3-205ENST00000592017 CXCL3P19876 107 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 FXYD7P58549 80 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 NUTF2P61970 127 aaKnown RBP10.15□□□□□ -0.78
CLIP3-205ENST00000592017 PMS2P11Q13670 270 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 FCN2Q15485 313 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 RGS21Q2M5E4 152 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 RNF182Q8N6D2 247 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 PFDN5Q99471 154 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 RNF126Q9BV68 326 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 NPCDR1Q9BY65 106 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 MED28Q9H204 178 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 DNAJC4Q9NNZ3 241 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 XCL2Q9UBD3 114 aa10.15□□□□□ -0.78
CLIP3-205ENST00000592017 A0A087X0K7 114 aa10.14□□□□□ -0.79
CLIP3-205ENST00000592017 DEFB4AO15263 64 aa10.14□□□□□ -0.79
CLIP3-205ENST00000592017 MPDU1O75352 247 aa10.14□□□□□ -0.79
CLIP3-205ENST00000592017 RPL29P47914 159 aaKnown RBP10.14□□□□□ -0.79
CLIP3-205ENST00000592017 BPIFA4PQ86YQ2 179 aa10.14□□□□□ -0.79
CLIP3-205ENST00000592017 ZNF738Q8NE65 137 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms