RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 C1QTNF4Q9BXJ3 329 aa8.8□□□□□ -1
TPM4-212ENST00000590180 SAV1Q9H4B6 383 aaPredicted RBP8.8□□□□□ -1
TPM4-212ENST00000590180 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
TPM4-212ENST00000590180 H3BRN7 92 aa8.79□□□□□ -1
TPM4-212ENST00000590180 PRAF2O60831 178 aa8.79□□□□□ -1
TPM4-212ENST00000590180 RLN2P04090 185 aa8.79□□□□□ -1
TPM4-212ENST00000590180 RPL7P18124 248 aaKnown RBP8.79□□□□□ -1
TPM4-212ENST00000590180 FXYD7P58549 80 aa8.79□□□□□ -1
TPM4-212ENST00000590180 IGFL4Q6B9Z1 124 aa8.79□□□□□ -1
TPM4-212ENST00000590180 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
TPM4-212ENST00000590180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.79□□□□□ -1
TPM4-212ENST00000590180 PATE2Q6UY27 113 aa8.79□□□□□ -1
TPM4-212ENST00000590180 FOXI2Q6ZQN5 318 aa8.79□□□□□ -1
TPM4-212ENST00000590180 ZNF546Q86UE3 836 aa8.79□□□□□ -1
TPM4-212ENST00000590180 STX12Q86Y82 276 aa8.79□□□□□ -1
TPM4-212ENST00000590180 TMEM252Q8N6L7 170 aa8.79□□□□□ -1
TPM4-212ENST00000590180 LRRC20Q8TCA0 184 aa8.79□□□□□ -1
TPM4-212ENST00000590180 UHRF2Q96PU4 802 aa8.79□□□□□ -1
TPM4-212ENST00000590180 ARV1Q9H2C2 271 aa8.79□□□□□ -1
TPM4-212ENST00000590180 C11orf1Q9H5F2 150 aa8.79□□□□□ -1
TPM4-212ENST00000590180 RPRMQ9NS64 109 aa8.79□□□□□ -1
TPM4-212ENST00000590180 UQCC1Q9NVA1 299 aa8.79□□□□□ -1
TPM4-212ENST00000590180 F6UB75 175 aa8.78□□□□□ -1
TPM4-212ENST00000590180 S100A11P31949 105 aa8.78□□□□□ -1
TPM4-212ENST00000590180 CAMLGP49069 296 aa8.78□□□□□ -1
TPM4-212ENST00000590180 SULT1A1P50225 295 aa8.78□□□□□ -1
TPM4-212ENST00000590180 NANOS2P60321 138 aaKnown RBP8.78□□□□□ -1
TPM4-212ENST00000590180 PXDC1Q5TGL8 231 aa8.78□□□□□ -1
TPM4-212ENST00000590180 SPATA31B1PQ5VZV4 182 aa8.78□□□□□ -1
TPM4-212ENST00000590180 Q6ZRG5 221 aa8.78□□□□□ -1
TPM4-212ENST00000590180 CSNK1G2-AS1Q8NCQ2 148 aa8.78□□□□□ -1
TPM4-212ENST00000590180 C20orf173Q96LM9 149 aa8.78□□□□□ -1
TPM4-212ENST00000590180 MGST2Q99735 147 aa8.78□□□□□ -1
TPM4-212ENST00000590180 LYRM2Q9NU23 88 aaPredicted RBP8.78□□□□□ -1
TPM4-212ENST00000590180 RNF24Q9Y225 148 aa8.78□□□□□ -1
TPM4-212ENST00000590180 KLK5Q9Y337 293 aaPredicted RBP8.78□□□□□ -1
TPM4-212ENST00000590180 IGHV4-28A0A0C4DH34 117 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 IGSF23A1L1A6 192 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 NUPR2A6NF83 97 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 SSNA1O43805 119 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 COX7A2P2O60397 106 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 RBMY1A1P0DJD3 496 aaKnown RBP8.77□□□□□ -1.01
TPM4-212ENST00000590180 RBMY1CP0DJD4 496 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 MIFP14174 115 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 HBG1P69891 147 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 HBG2P69892 147 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 CYCSP99999 105 aaKnown RBP8.77□□□□□ -1.01
TPM4-212ENST00000590180 PSG9Q00887 426 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 RBMY1FQ15415 496 aaKnown RBP8.77□□□□□ -1.01
TPM4-212ENST00000590180 LRRC37A5PQ49AS3 106 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 FAM78BQ5VT40 261 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 LINC00305Q7Z4B0 112 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 PHLDA1Q8WV24 401 aaPredicted RBP8.77□□□□□ -1.01
TPM4-212ENST00000590180 C17orf77Q96MU5 243 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 MARVELD1Q9BSK0 173 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 MFFQ9GZY8 342 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 C11orf68Q9H3H3 251 aaKnown RBP8.77□□□□□ -1.01
TPM4-212ENST00000590180 CSMD3Q7Z407 3707 aa8.77□□□□□ -1.01
TPM4-212ENST00000590180 IGHV3OR16-12A0A075B7B8 117 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 A0A0J9YX75 114 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 ZNF705EA8MWA4 302 aaPredicted RBP8.76□□□□□ -1.01
TPM4-212ENST00000590180 BAXQ07812 192 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 ATP6V1FQ16864 119 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 C10orf113Q5VZT2 155 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 MIC13Q5XKP0 118 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 RNF182Q8N6D2 247 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 Q8NAQ8 132 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 NMES1Q9C002 83 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 DNAJC4Q9NNZ3 241 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 WDR83OSQ9Y284 106 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 X6R8D5 127 aa8.76□□□□□ -1.01
TPM4-212ENST00000590180 ELOA3CA0A087WX78 387 aaPredicted RBP8.75□□□□□ -1.01
TPM4-212ENST00000590180 TRAV8-2A0A0B4J237 113 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 UBE2L5PA0A1B0GUS4 154 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 E5RGE8 158 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 SNRPCP09234 159 aaKnown RBP8.75□□□□□ -1.01
TPM4-212ENST00000590180 NHLH2Q02577 135 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 ZNF738Q8NE65 137 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 OR1L4Q8NGR5 311 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 TMEM37Q8WXS4 190 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 CLUHP3Q96NS8 147 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 SLC25A31Q9H0C2 315 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 SLC35B3Q9H1N7 401 aa8.75□□□□□ -1.01
TPM4-212ENST00000590180 STARD9Q9P2P6 4700 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 DYNC2H1Q8NCM8 4307 aaKnown RBP8.74□□□□□ -1.01
TPM4-212ENST00000590180 DUSP14O95147 198 aaKnown RBP8.74□□□□□ -1.01
TPM4-212ENST00000590180 ZNF705DP0CH99 300 aaPredicted RBP8.74□□□□□ -1.01
TPM4-212ENST00000590180 ZNF705BP0CI00 300 aaPredicted RBP8.74□□□□□ -1.01
TPM4-212ENST00000590180 FGF7P21781 194 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 VWC2Q2TAL6 325 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 BPIFA4PQ86YQ2 179 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 SLC39A9Q9NUM3 307 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 PPP1R14DQ9NXH3 145 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 OR5AC2Q9NZP5 309 aa8.74□□□□□ -1.01
TPM4-212ENST00000590180 A0A087X0K7 114 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 TRAV5A0A0B4J249 113 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 H0YIZ8 118 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 H3BTX0 84 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 LY6G6CO95867 125 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 CXCL3P19876 107 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms