RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SMCO3A2RU48 225 aa12.77□□□□□ -0.37
PRKCSH-211ENST00000590098 DUSP14O95147 198 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-211ENST00000590098 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.77□□□□□ -0.37
PRKCSH-211ENST00000590098 TMEM182Q6ZP80 229 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-211ENST00000590098 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.37
PRKCSH-211ENST00000590098 IGF2BP2-AS1Q96M15 143 aa12.77□□□□□ -0.37
PRKCSH-211ENST00000590098 IL5P05113 134 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 INPP1P49441 399 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 DAD1P61803 113 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 FGL1Q08830 312 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 LGALS9BQ3B8N2 356 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 TMEM144Q7Z5S9 345 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 PKD1P98161 4303 aa12.76□□□□□ -0.37
PRKCSH-211ENST00000590098 C9orf170A2RU37 121 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 A8MTW9 85 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 RAP2BP61225 183 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 SPANXN2Q5MJ10 180 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 AMTNQ6UX39 209 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 CYP2G1PQ6ZSU1 146 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 C17orf77Q96MU5 243 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 PSENENQ9NZ42 101 aa12.75□□□□□ -0.37
PRKCSH-211ENST00000590098 HYPMO75409 117 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 ADAP1O75689 374 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 INSP01308 110 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 POLR2GP62487 172 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 ID3Q02535 119 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 SPINK13Q1W4C9 94 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 IGFL4Q6B9Z1 124 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 ZNF738Q8NE65 137 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 HIGD1AQ9Y241 93 aa12.74□□□□□ -0.37
PRKCSH-211ENST00000590098 IGLV2-18A0A075B6J9 118 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 A0A1B0GVY2 172 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 H3BRN7 92 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 M0R2Z0 102 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 RTL8CO15255 209 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 SSSCA1O60232 199 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 OR5G3P0C626 314 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 SELENOTP62341 195 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 RNF212Q495C1 297 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 TMEM88Q6PEY1 159 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 RNF182Q8N6D2 247 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 OR11H7Q8NGC8 314 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 SHANK2-AS3Q9BTD1 123 aa12.73□□□□□ -0.37
PRKCSH-211ENST00000590098 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
PRKCSH-211ENST00000590098 NAP1L6A6NFF2 107 aa12.72□□□□□ -0.37
PRKCSH-211ENST00000590098 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-211ENST00000590098 LINC00869P0C866 280 aa12.72□□□□□ -0.37
PRKCSH-211ENST00000590098 B2MP61769 119 aa12.72□□□□□ -0.37
PRKCSH-211ENST00000590098 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 NDUFB6O95139 128 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 RRAS2P62070 204 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 TRIQKQ629K1 86 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 SMIM8Q96KF7 97 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 SRRQ9GZT4 340 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 PPP1R14DQ9NXH3 145 aa12.71□□□□□ -0.37
PRKCSH-211ENST00000590098 DYNC1H1Q14204 4646 aaKnown RBP12.71□□□□□ -0.38
PRKCSH-211ENST00000590098 DNAH11Q96DT5 4516 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 CRXO43186 299 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 OR4E1P0C645 316 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 PLP1P60201 277 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 RHOBP62745 196 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 DLK1P80370 383 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 SOHLH1Q5JUK2 328 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 C15orf53Q8NAA6 179 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 NPVFQ9HCQ7 196 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 MGAT4CQ9UBM8 478 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 FLVCR2Q9UPI3 526 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 RNF24Q9Y225 148 aa12.7□□□□□ -0.38
PRKCSH-211ENST00000590098 NACAE9PAV3 2078 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 PMS2P5A8MQ11 134 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 BOLA2-SMG1P6H3BVE0 249 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 SCGB1D2O95969 90 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 PRM2P04554 102 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 ANXA7P20073 488 aaKnown RBP12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 HIST1H1AQ02539 215 aaPredicted RBP12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 C4orf46Q504U0 113 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 BAP18Q8IXM2 172 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 OR10P1Q8NGE3 313 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 UHRF2Q96PU4 802 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 ARL6Q9H0F7 186 aa12.69□□□□□ -0.38
PRKCSH-211ENST00000590098 TRAV12-2A0A075B6T6 113 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 LINC00854A0A1B0GVQ3 168 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 CENPXA8MT69 81 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 FNDC10F2Z333 226 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 TSPOP30536 169 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 PSG3Q16557 428 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 BAK1Q16611 211 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 TEPPQ6URK8 271 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
PRKCSH-211ENST00000590098 Q6ZR54 194 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms