RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 DDTP30046 118 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 ZNF295-AS1Q8N0V1 137 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 HIST3H2BBQ8N257 126 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 IGHV3OR16-12A0A075B7B8 117 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 SIAH2O43255 324 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 SNAI2O43623 268 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 COX19Q49B96 90 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 CENPVQ7Z7K6 275 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-208ENST00000589797 C18orf15Q96N68 181 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 LEPROTL1O95214 131 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 AMBPP02760 352 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 ADORA2A-AS1P86434 159 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 IGF2-ASQ6U949 168 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 TMEM170AQ8WVE7 144 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 M0R381 172 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 HBBP68871 147 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
RETREG3-208ENST00000589797 BTF3P20290 206 aaKnown RBP11.68□□□□□ -0.54
RETREG3-208ENST00000589797 VAMP3Q15836 100 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 FAM162BQ5T6X4 162 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 ZNF138P52744 262 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 TAS2R60P59551 318 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 RPP21Q9H633 154 aaKnown RBP11.68□□□□□ -0.54
RETREG3-208ENST00000589797 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 PFN1P07737 140 aaKnown RBP11.68□□□□□ -0.54
RETREG3-208ENST00000589797 FXYD7P58549 80 aa11.68□□□□□ -0.54
RETREG3-208ENST00000589797 GPX1P07203 203 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 IGKV1OR2-108A0A075B7D4 117 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 NDUFB8O95169 186 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 PAFAH1B2P68402 229 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 TMEM136Q6ZRR5 245 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 ZNF841Q6ZN19 808 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 MCRIP2Q9BUT9 160 aaKnown RBP11.67□□□□□ -0.54
RETREG3-208ENST00000589797 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 MRPL36Q9P0J6 103 aaKnown RBP11.67□□□□□ -0.54
RETREG3-208ENST00000589797 CFAP47Q6ZTR5 3102 aa11.67□□□□□ -0.54
RETREG3-208ENST00000589797 A0A1W2PRX2 142 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 CD99P14209 185 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 AKAP13Q12802 2813 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 TCRAP04437 139 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 BMI1P35226 326 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 C3orf36Q3SXR2 165 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 FBLN7Q53RD9 439 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 M0R143 59 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 C17orf77Q96MU5 243 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 OSTCQ9NRP0 149 aa11.66□□□□□ -0.54
RETREG3-208ENST00000589797 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 NPFFO15130 113 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
RETREG3-208ENST00000589797 SPATA45Q537H7 98 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 LOC400499M0QZD8 3231 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 FOLR2P14207 255 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 DDB2Q92466 427 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
RETREG3-208ENST00000589797 TCAPO15273 167 aa11.65□□□□□ -0.55
RETREG3-208ENST00000589797 PSG9Q00887 426 aa11.65□□□□□ -0.55
RETREG3-208ENST00000589797 CDSNQ15517 529 aa11.65□□□□□ -0.55
RETREG3-208ENST00000589797 CYB5R2Q6BCY4 276 aa11.65□□□□□ -0.55
RETREG3-208ENST00000589797 TMEM116Q8NCL8 245 aa11.65□□□□□ -0.55
RETREG3-208ENST00000589797 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 TRGV9Q99603 122 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 NRN1Q9NPD7 142 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 C9JCJ5 164 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 FAM106AQ4KMX7 169 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 PTTG1IPP53801 180 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 LCN12Q6JVE5 192 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
RETREG3-208ENST00000589797 NMUP48645 174 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 DYNLRB2Q8TF09 96 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PHLDA3Q9Y5J5 127 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PRR20EP86478 221 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PRR20CP86479 221 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PRR20DP86480 221 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PRR20BP86481 221 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PRR20AP86496 221 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PVRIGQ6DKI7 326 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 FAM71F2Q6NXP2 309 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 PARD6GQ9BYG4 376 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-208ENST00000589797 CPAMD8Q8IZJ3 1885 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 IGLC7A0M8Q6 106 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 FOXL1Q12952 345 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 ZNF562Q6V9R5 426 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms