RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 ATP5IP56385 69 aaPredicted RBP2.53□□□□□ -2.01
ZNF540-207ENST00000589285 TAS2R31P59538 309 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 AKR1C1Q04828 323 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 PAX8Q06710 450 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 PSG5Q15238 335 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 C5orf64Q2M2E5 130 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 CBLN2Q8IUK8 224 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 SVBPQ8N300 66 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 LY6G5BQ8NDX9 201 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 OR5C1Q8NGR4 320 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 OR2T6Q8NHC8 308 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 SRSF12Q8WXF0 261 aaKnown RBP2.53□□□□□ -2.01
ZNF540-207ENST00000589285 ST6GALNAC6Q969X2 333 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 RSG1Q9BU20 258 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 C20orf24Q9BUV8 137 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 GFRA4Q9GZZ7 299 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 PRO1933Q9H354 126 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 RBKSQ9H477 322 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 PSENENQ9NZ42 101 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 TCF19Q9Y242 345 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 CARHSP1Q9Y2V2 147 aaKnown RBP2.53□□□□□ -2.01
ZNF540-207ENST00000589285 C20orf202A1L168 122 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 H0Y980 276 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 K7EP13 123 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 K7EPK0 472 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 NBR2O15453 112 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 SYNGR2O43760 224 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 CRLF1O75462 422 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 OR2A4O95047 310 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 HRASP01112 189 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 RBP4P02753 201 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 ADCYAP1P18509 176 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 ID1P41134 155 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 CRYBA4P53673 196 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 UBE2KP61086 200 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 SSBP1Q04837 148 aaKnown RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 WT1-ASQ06250 92 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 SLC38A11Q08AI6 406 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 KIAA0141Q14154 515 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 NSUN5P1Q3KNT7 163 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 VMA21Q3ZAQ7 101 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 GCSAMLQ5JQS6 135 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 RPL7L1Q6DKI1 246 aaKnown RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 ACOT7LQ6ZUV0 252 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 INO80EQ8NBZ0 244 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM158Q8WZ71 300 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM56Q96MV1 263 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 OR2A7Q96R45 310 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 SH3BGRL3Q9H299 93 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 GEMIN7Q9H840 131 aaKnown RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 SLC2A8Q9NY64 477 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF107Q9UII5 783 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM56-RWDD3S4R434 201 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 TRAV14DV4A0A0A6YYC5 116 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 TRBV6-6A0A0A6YYG2 114 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 A0A1B0GW64 132 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 OR2T8A6NH00 312 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 COLCA2A8K830 154 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 RNF212BA8MTL3 300 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 PPP5D1E7EU14 171 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 M0R1W7 72 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 CYB5BO43169 146 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 KBTBD11O94819 623 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 BRI3O95415 125 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 CD5P06127 495 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 OR8U8P0C7N1 319 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 RPL12P30050 165 aaKnown RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 RPL27AP46776 148 aaKnown RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 DYNLT3P51808 116 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 PYY3Q5JQD4 70 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 CENPVQ7Z7K6 275 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 THAP8Q8NA92 274 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 OR2T10Q8NGZ9 312 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 C2orf50Q96LR7 162 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 SLC25A22Q9H936 323 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 PLEKHA3Q9HB20 300 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 MRPL36Q9P0J6 103 aaKnown RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 ANAPC10Q9UM13 185 aa2.52□□□□□ -2.01
ZNF540-207ENST00000589285 AMMECR1Q9Y4X0 333 aaPredicted RBP2.52□□□□□ -2.01
ZNF540-207ENST00000589285 TEX50A0A1B0GTY4 177 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 IGSF23A1L1A6 192 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM218A2RU14 115 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 HMSDA8MTL9 139 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 SNURFLB1AK76 121 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 PRAF2O60831 178 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 GGCTO75223 188 aaKnown RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ORM2P19652 201 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 GPR183P32249 361 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TFPI2P48307 235 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 BAXQ07812 192 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 RAB31Q13636 194 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 SURF2Q15527 256 aaPredicted RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 MSMO1Q15800 293 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF833PQ6ZTB9 187 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TMUB2Q71RG4 321 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM144Q7Z5S9 345 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 SLC35E3Q7Z769 313 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms