RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 SEC11AP67812 179 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 ZNF816Q0VGE8 651 aaPredicted RBP3.32□□□□□ -1.88
LIG3-211ENST00000588713 ZNF146Q15072 292 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 GUSBP1Q15486 140 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 EFNB3Q15768 340 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 NSUN5P1Q3KNT7 163 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 CT83Q5H943 113 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 GCSAMLQ5JQS6 135 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 SPATA46Q5T0L3 261 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 BVES-AS1Q5T3Y7 98 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 IBA57Q5T440 356 aaKnown RBP3.32□□□□□ -1.88
LIG3-211ENST00000588713 PRAMEF5Q5TYX0 476 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 PRAMEF6Q5VXH4 476 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 MIC13Q5XKP0 118 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 SLC35E4Q6ICL7 350 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 OR4A47Q6IF82 309 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 SLC25A34Q6PIV7 304 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 TEPPQ6URK8 271 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 GTF2H5Q6ZYL4 71 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 BATF2Q8N1L9 274 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 ZCCHC24Q8N2G6 241 aaKnown RBP3.32□□□□□ -1.88
LIG3-211ENST00000588713 STPG3Q8N7X2 389 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 ZNF439Q8NDP4 499 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 ZNF596Q8TC21 504 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 DPF1Q92782 380 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
LIG3-211ENST00000588713 GALMQ96C23 342 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 POM121L2Q96KW2 1035 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 CLEC7AQ9BXN2 247 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 TMEM191AQ9H0A3 160 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 NPVFQ9HCQ7 196 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 SCRT2Q9NQ03 307 aa3.32□□□□□ -1.88
LIG3-211ENST00000588713 ZNF331Q9NQX6 463 aaPredicted RBP3.32□□□□□ -1.88
LIG3-211ENST00000588713 A0A1B0GXF2 115 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 OR4C46A6NHA9 309 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 C2orf70A6NJV1 201 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 C15orf61A6NNL5 157 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 C17orf98A8MV24 154 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 C12orf77C9JDV5 145 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 NPIPB6E9PJ23 425 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 SLC25A17O43808 307 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 RHBDL1O75783 438 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 HBZP02008 142 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 ADH4P08319 380 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 OR5AL1P0C617 328 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 NBEAP1P0C6P0 100 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 PATE4P0C8F1 98 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 SMIM17P0DL12 118 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 HIST1H1EP10412 219 aaKnown RBP3.31□□□□□ -1.88
LIG3-211ENST00000588713 PSG1P11464 419 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 NTF3P20783 257 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 ATP5IP56385 69 aaPredicted RBP3.31□□□□□ -1.88
LIG3-211ENST00000588713 ERVK-16P61578 105 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 RPL30P62888 115 aaKnown RBP3.31□□□□□ -1.88
LIG3-211ENST00000588713 SLAQ13239 276 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 PSG3Q16557 428 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 SMIM21Q3B7S5 101 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 Q56UQ5 140 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 UFSP1Q6NVU6 142 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 RNASEKQ6P5S7 137 aaKnown RBP3.31□□□□□ -1.88
LIG3-211ENST00000588713 NHLRC2Q8NBF2 726 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 OR52L2PQ8NGH6 319 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 OR5A1Q8NGJ0 315 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 OR10D3Q8NH80 312 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 FGFBP3Q8TAT2 258 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 NUDT11Q96G61 164 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 GRAMD2BQ96HH9 432 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 MS4A5Q9H3V2 200 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 PLEKHA3Q9HB20 300 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 TECRQ9NZ01 308 aaKnown RBP3.31□□□□□ -1.88
LIG3-211ENST00000588713 JPT1Q9UK76 154 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 FOXA2Q9Y261 457 aaPredicted RBP3.31□□□□□ -1.88
LIG3-211ENST00000588713 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
LIG3-211ENST00000588713 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 C5orf49A4QMS7 147 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 A6NDN8 102 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 HELTA6NFD8 242 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 OR2T8A6NH00 312 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 SRRM5B3KS81 715 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 SYS1-DBNDD2H3BUS1 97 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 K7EP34 96 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 CXCL13O43927 109 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 RBMXL2O75526 392 aaKnown RBP3.3□□□□□ -1.88
LIG3-211ENST00000588713 LY6G6CO95867 125 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 IGLV2-8P01709 118 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 LIPFP07098 398 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 OR9G9P0C7N8 305 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 IGLC1P0CG04 106 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
LIG3-211ENST00000588713 CA6P23280 308 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 NTF4P34130 210 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 SSTR5P35346 364 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 BRWD1-AS2P59051 145 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 LMO4P61968 165 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 HBBP68871 147 aa3.3□□□□□ -1.88
LIG3-211ENST00000588713 ARF1P84077 181 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms