RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TXNDC17Q9BRA2 123 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 C2CD3Q4AC94 2353 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 F8W036 122 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 OR4F5Q8NH21 305 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 OR4F4Q96R69 305 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 C20orf24Q9BUV8 137 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 U3KQE9 123 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 MAST4O15021 2626 aa19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 A0A1W2PRE2 83 aa19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 BUB3O43684 328 aa19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 SNRPCP09234 159 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 SRSF2Q01130 221 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 C18orf65Q6ZTR6 163 aa19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 METTL26Q96S19 204 aa19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 CARHSP1Q9Y2V2 147 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-210ENST00000588555 H3BQ15 152 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 ZNF207O43670 478 aaKnown RBP19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 NBEAP1P0C6P0 100 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 IGLC2P0DOY2 106 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 S100A7P31151 101 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 GPHB5Q86YW7 130 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 CCDC28AQ8IWP9 274 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 GGTLC3B5MD39 225 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 APOHP02749 345 aaPredicted RBP19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 HIST1H1EP10412 219 aaKnown RBP19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 ZNF586Q9NXT0 402 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 RNF24Q9Y225 148 aa19.93■□□□□ 0.78
SCAMP4-210ENST00000588555 TMEM250H0YL14 139 aa19.92■□□□□ 0.78
SCAMP4-210ENST00000588555 NPPCP23582 126 aa19.92■□□□□ 0.78
SCAMP4-210ENST00000588555 FAM90A2PQ658T7 463 aa19.92■□□□□ 0.78
SCAMP4-210ENST00000588555 IGHV4OR15-8A0A075B7B6 117 aa19.91■□□□□ 0.78
SCAMP4-210ENST00000588555 A0A087WW49 117 aa19.91■□□□□ 0.78
SCAMP4-210ENST00000588555 PDE6DO43924 150 aa19.91■□□□□ 0.78
SCAMP4-210ENST00000588555 BLNKQ8WV28 456 aa19.91■□□□□ 0.78
SCAMP4-210ENST00000588555 C4orf3Q8WVX3 66 aa19.91■□□□□ 0.78
SCAMP4-210ENST00000588555 TEP1Q99973 2627 aaKnown RBP19.91■□□□□ 0.78
SCAMP4-210ENST00000588555 SOHLH1Q5JUK2 328 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 WFDC12Q8WWY7 111 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 RNF114Q9Y508 228 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 APOC3P02656 99 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 RPL7P18124 248 aaKnown RBP19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 CEBPGP53567 150 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 PROK1P58294 105 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 RPEL1Q2QD12 228 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 OR8I2Q8N0Y5 310 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 OR4F17Q8NGA8 305 aa19.9■□□□□ 0.78
SCAMP4-210ENST00000588555 H3BTX0 84 aa19.89■□□□□ 0.77
SCAMP4-210ENST00000588555 CD28P10747 220 aa19.89■□□□□ 0.77
SCAMP4-210ENST00000588555 MYCNOSP40205 109 aa19.89■□□□□ 0.77
SCAMP4-210ENST00000588555 FAM106AQ4KMX7 169 aa19.89■□□□□ 0.77
SCAMP4-210ENST00000588555 C1orf194Q5T5A4 169 aa19.89■□□□□ 0.77
SCAMP4-210ENST00000588555 HIST2H2BDQ6DRA6 164 aa19.89■□□□□ 0.77
SCAMP4-210ENST00000588555 ZNF320A2RRD8 509 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 SMAD5-AS1Q9Y6J3 95 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 TRBV19A0A075B6N1 114 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 IGHV3OR16-13A0A075B7E8 117 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 IGHV3-49A0A0A0MS15 119 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 IGHV3-74A0A0B4J1X5 117 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 IGHV3-66A0A0C4DH42 116 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 F6UZH7 168 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 NDUFB4O95168 129 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 SUMO1P63165 101 aaKnown RBP19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 GUCA2BQ16661 112 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 KHDC1LQ5JSQ8 128 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 C17orf77Q96MU5 243 aa19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 NKX6-2Q9C056 277 aaPredicted RBP19.88■□□□□ 0.77
SCAMP4-210ENST00000588555 RANP62826 216 aaKnown RBP19.87■□□□□ 0.77
SCAMP4-210ENST00000588555 DEFB136Q30KP8 78 aa19.87■□□□□ 0.77
SCAMP4-210ENST00000588555 ELOVL1Q9BW60 279 aa19.87■□□□□ 0.77
SCAMP4-210ENST00000588555 DAZ1Q9NQZ3 744 aaKnown RBP19.87■□□□□ 0.77
SCAMP4-210ENST00000588555 SCO2A0A1W2PP80 73 aa19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 K7EMT4 169 aa19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 HAX1O00165 279 aa19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 HOXD3P31249 432 aaPredicted RBP19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 C11orf44Q8N8P7 122 aa19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 KLHL30-AS1Q8NEE0 82 aa19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 C11orf52Q96A22 123 aa19.86■□□□□ 0.77
SCAMP4-210ENST00000588555 JMJD1CQ15652 2540 aa19.85■□□□□ 0.77
SCAMP4-210ENST00000588555 TM4SF20Q53R12 229 aa19.85■□□□□ 0.77
SCAMP4-210ENST00000588555 GPR82Q96P67 336 aa19.85■□□□□ 0.77
SCAMP4-210ENST00000588555 C16orf54Q6UWD8 224 aa19.85■□□□□ 0.77
SCAMP4-210ENST00000588555 REC114Q7Z4M0 266 aa19.85■□□□□ 0.77
SCAMP4-210ENST00000588555 SLC17A3O00476 420 aa19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 PDE6HQ13956 83 aa19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 GLMPQ8WWB7 406 aa19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 RPUSD4Q96CM3 377 aaKnown RBP19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 CITED2Q99967 270 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 PARLQ9H300 379 aa19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 Q9H3A6 140 aa19.84■□□□□ 0.77
SCAMP4-210ENST00000588555 IGHV7-4-1A0A0J9YVY3 117 aa19.83■□□□□ 0.77
SCAMP4-210ENST00000588555 A8MWP6 167 aa19.83■□□□□ 0.77
SCAMP4-210ENST00000588555 LGALS9O00182 355 aa19.83■□□□□ 0.77
SCAMP4-210ENST00000588555 OR11H1Q8NG94 326 aa19.83■□□□□ 0.77
SCAMP4-210ENST00000588555 DERL1Q9BUN8 251 aa19.83■□□□□ 0.77
SCAMP4-210ENST00000588555 UFC1Q9Y3C8 167 aa19.83■□□□□ 0.77
SCAMP4-210ENST00000588555 LINC01619G3V211 115 aa19.83■□□□□ 0.76
SCAMP4-210ENST00000588555 KLF5Q13887 457 aaPredicted RBP19.83■□□□□ 0.76
SCAMP4-210ENST00000588555 SIGLEC15Q6ZMC9 328 aa19.83■□□□□ 0.76
SCAMP4-210ENST00000588555 A0A087X0K7 114 aa19.82■□□□□ 0.76
SCAMP4-210ENST00000588555 TMEM213A2RRL7 107 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms