RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 WDR61Q9GZS3 305 aaKnown RBP14.91□□□□□ -0.02
DDX39A-207ENST00000588542 ZMAT4Q9H898 229 aa14.91□□□□□ -0.02
DDX39A-207ENST00000588542 SLC39A9Q9NUM3 307 aa14.91□□□□□ -0.02
DDX39A-207ENST00000588542 PXMP4Q9Y6I8 212 aa14.91□□□□□ -0.02
DDX39A-207ENST00000588542 ELOA3CA0A087WX78 387 aaPredicted RBP14.9□□□□□ -0.02
DDX39A-207ENST00000588542 COX7A2P2O60397 106 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 RPL35AP18077 110 aaKnown RBP14.9□□□□□ -0.02
DDX39A-207ENST00000588542 GALR1P47211 349 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 B2MP61769 119 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 FGL1Q08830 312 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 PSMG4Q5JS54 123 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 MORN5Q5VZ52 161 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 LINC00305Q7Z4B0 112 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 RCHY1Q96PM5 261 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 SPATA25Q9BR10 227 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 RSG1Q9BU20 258 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 SMIM3Q9BZL3 60 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 WFDC1Q9HC57 220 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 DNAH7Q8WXX0 4024 aa14.9□□□□□ -0.02
DDX39A-207ENST00000588542 G3V3Q6 166 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 MRPS12O15235 138 aaKnown RBP14.89□□□□□ -0.03
DDX39A-207ENST00000588542 C10orf113Q5VZT2 155 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 Q6ZRG5 221 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 S100A7AQ86SG5 101 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 RETNQ9HD89 108 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 DNAJC4Q9NNZ3 241 aa14.89□□□□□ -0.03
DDX39A-207ENST00000588542 SNRPD3P62318 126 aaKnown RBP14.88□□□□□ -0.03
DDX39A-207ENST00000588542 OR1L4Q8NGR5 311 aa14.88□□□□□ -0.03
DDX39A-207ENST00000588542 AQP10Q96PS8 301 aa14.88□□□□□ -0.03
DDX39A-207ENST00000588542 KIR2DL5BA0A0G2JN68 375 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 KIR2DL5BA0A0G2JPC4 375 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 KNCNA6PVL3 124 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 RPL7P18124 248 aaKnown RBP14.87□□□□□ -0.03
DDX39A-207ENST00000588542 PSMB3P49720 205 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 MEOX2P50222 304 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 APOC4P55056 127 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 KIR2DL5AQ8N109 375 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 OR2T35Q8NGX2 323 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 KIR2DL5BQ8NHK3 375 aa14.87□□□□□ -0.03
DDX39A-207ENST00000588542 ISLRO14498 428 aa14.86□□□□□ -0.03
DDX39A-207ENST00000588542 GCSAMLQ5JQS6 135 aa14.86□□□□□ -0.03
DDX39A-207ENST00000588542 PFDN5Q99471 154 aa14.86□□□□□ -0.03
DDX39A-207ENST00000588542 A0A087X0K7 114 aa14.85□□□□□ -0.03
DDX39A-207ENST00000588542 ID1P41134 155 aa14.85□□□□□ -0.03
DDX39A-207ENST00000588542 TRPT1Q86TN4 253 aaKnown RBP14.85□□□□□ -0.03
DDX39A-207ENST00000588542 STHQ8IWL8 128 aa14.85□□□□□ -0.03
DDX39A-207ENST00000588542 C20orf173Q96LM9 149 aa14.85□□□□□ -0.03
DDX39A-207ENST00000588542 PARD6GQ9BYG4 376 aaPredicted RBP14.85□□□□□ -0.03
DDX39A-207ENST00000588542 RNF24Q9Y225 148 aa14.85□□□□□ -0.03
DDX39A-207ENST00000588542 TRAV8-2A0A0B4J237 113 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 TRAV5A0A0B4J249 113 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 UBE2CO00762 179 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 IFNA5P01569 189 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 ATF4P18848 351 aaPredicted RBP14.84□□□□□ -0.03
DDX39A-207ENST00000588542 DEFB1P60022 68 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 ACTL10Q5JWF8 245 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 SAMD13Q5VXD3 122 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 ZNF709Q8N972 641 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 GATAD1Q8WUU5 269 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 C16orf92Q96LL3 132 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 LINC00052Q96N35 136 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 CSTL1Q9H114 145 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 TNFSF18Q9UNG2 199 aa14.84□□□□□ -0.03
DDX39A-207ENST00000588542 FXYD6-FXYD2A0A087WZ82 144 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 RNF222A6NCQ9 220 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 GDF5OSQ5U4N7 250 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 Q6ZWC4 215 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 BPIFA4PQ86YQ2 179 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 OVOL2Q9BRP0 275 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 RFNGQ9Y644 331 aa14.83□□□□□ -0.04
DDX39A-207ENST00000588542 C17orf112F2Z3M2 114 aa14.82□□□□□ -0.04
DDX39A-207ENST00000588542 IGFL4Q6B9Z1 124 aa14.82□□□□□ -0.04
DDX39A-207ENST00000588542 SCGB1C1Q8TD33 95 aa14.82□□□□□ -0.04
DDX39A-207ENST00000588542 KCNIP2Q9NS61 270 aa14.82□□□□□ -0.04
DDX39A-207ENST00000588542 H3BMM0 161 aa14.81□□□□□ -0.04
DDX39A-207ENST00000588542 SMLR1H3BR10 107 aa14.81□□□□□ -0.04
DDX39A-207ENST00000588542 SNRPCP09234 159 aaKnown RBP14.81□□□□□ -0.04
DDX39A-207ENST00000588542 IGLC2P0DOY2 106 aa14.81□□□□□ -0.04
DDX39A-207ENST00000588542 DEFB135Q30KP9 77 aa14.81□□□□□ -0.04
DDX39A-207ENST00000588542 SPATA31B1PQ5VZV4 182 aa14.81□□□□□ -0.04
DDX39A-207ENST00000588542 SAV1Q9H4B6 383 aaPredicted RBP14.81□□□□□ -0.04
DDX39A-207ENST00000588542 H3BQ15 152 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 GIG44P09565 113 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-207ENST00000588542 HLA-DRB4P13762 266 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 FAM78BQ5VT40 261 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 Q6ZNX1 250 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 RNF182Q8N6D2 247 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 INO80EQ8NBZ0 244 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-207ENST00000588542 RNF183Q96D59 192 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 WWC2-AS2Q96NR7 200 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 TP53TG1Q9Y2A0 90 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 HLA-DRB4X5D2U9 266 aa14.8□□□□□ -0.04
DDX39A-207ENST00000588542 CA1P00915 261 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-207ENST00000588542 FFAR4Q5NUL3 377 aa14.79□□□□□ -0.04
DDX39A-207ENST00000588542 FOXI2Q6ZQN5 318 aa14.79□□□□□ -0.04
DDX39A-207ENST00000588542 RPRMQ9NS64 109 aa14.79□□□□□ -0.04
DDX39A-207ENST00000588542 F6UB75 175 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 SPRY2O43597 315 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 SPP1P10451 314 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms