RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SEPSECSQ9HD40 501 aaKnown RBP8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 KCNIP2Q9NS61 270 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 PFDN2Q9UHV9 154 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 DNAH3Q8TD57 4116 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 PFDN1O60925 122 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 EIF3GO75821 320 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 CD5P06127 495 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 CD7P09564 240 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 RAB2AP61019 212 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 FAM78BQ5VT40 261 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 STXBP6Q8NFX7 210 aa8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 SPAG8Q99932 426 aaPredicted RBP8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 AURKAIP1Q9NWT8 199 aaPredicted RBP8.01□□□□□ -1.13
SMARCA4-213ENST00000587988 HELTA6NFD8 242 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 DNASE2O00115 360 aaPredicted RBP8□□□□□ -1.13
SMARCA4-213ENST00000587988 MRPS12O15235 138 aaKnown RBP8□□□□□ -1.13
SMARCA4-213ENST00000587988 SNRPCP09234 159 aaKnown RBP8□□□□□ -1.13
SMARCA4-213ENST00000587988 M6PRP20645 277 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 S100A7P31151 101 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 ACOT6Q3I5F7 207 aaPredicted RBP8□□□□□ -1.13
SMARCA4-213ENST00000587988 Q8N1Y9 231 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 FAM24BQ8N5W8 94 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 OR2G3Q8NGZ4 309 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 DCANP1Q8TF63 244 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 GNPNAT1Q96EK6 184 aaPredicted RBP8□□□□□ -1.13
SMARCA4-213ENST00000587988 PLA2G2EQ9NZK7 142 aa8□□□□□ -1.13
SMARCA4-213ENST00000587988 K7EQG2 157 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 SPP1P10451 314 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 RPL7P18124 248 aaKnown RBP7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 GALR1P47211 349 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 CD81P60033 236 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 PAFAH1B2P68402 229 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 SERF2P84101 59 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 S100A7AQ86SG5 101 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 FAM167A-AS1Q96KT0 104 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 SLC25A2Q9BXI2 301 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 WFDC10AQ9H1F0 79 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 NRN1Q9NPD7 142 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 RPRMQ9NS64 109 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 C19orf73Q9NVV2 129 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 ZMAT5Q9UDW3 170 aaKnown RBP7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 UBQLN2Q9UHD9 624 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 FUT9Q9Y231 359 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 BOLA1Q9Y3E2 137 aa7.99□□□□□ -1.13
SMARCA4-213ENST00000587988 OR4C46A6NHA9 309 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 BOLA2-SMG1P6H3BVE0 249 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 K7EIL1 84 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 SOCS3O14543 225 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 PYYP10082 97 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 RHOBP62745 196 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 BPIFA4PQ86YQ2 179 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 BAP18Q8IXM2 172 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 RPP25LQ8N5L8 163 aaKnown RBP7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 OR10G4Q8NGN3 311 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 OR10G9Q8NGN4 311 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 OR10G7Q8NGN6 311 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 STOML3Q8TAV4 291 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 GPR82Q96P67 336 aa7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 MRPL32Q9BYC8 188 aaKnown RBP7.98□□□□□ -1.13
SMARCA4-213ENST00000587988 TRAV2A0A0B4J234 112 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 H3BQ15 152 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 H3BTX0 84 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 IGLC2P0DOY2 106 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 TPT1P13693 172 aaKnown RBP7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 DEFA6Q01524 100 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 ZNF124Q15973 351 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 ODF3L2Q3SX64 289 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 TMEM41BQ5BJD5 291 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 IGFL4Q6B9Z1 124 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 SSX7Q7RTT5 188 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 GTSCR1Q86UQ5 136 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 SLC51BQ86UW2 128 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 ZNF503Q96F45 646 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 RNF24Q9Y225 148 aa7.97□□□□□ -1.13
SMARCA4-213ENST00000587988 NOTCH1P46531 2555 aa7.96□□□□□ -1.13
SMARCA4-213ENST00000587988 A0A087X0K7 114 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 TRAV8-2A0A0B4J237 113 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 A0A1W2PPV4 95 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 OR11H12B2RN74 326 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 SLC17A3O00476 420 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 MBP02144 154 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 ZNF688P0C7X2 276 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 CDC34P49427 236 aaPredicted RBP7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 EIF5AP63241 154 aaKnown RBP7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 ZNF726P1Q15940 193 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 AKR1C8PQ5T2L2 129 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 APRG1Q8IVJ8 170 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 DEFB125Q8N687 156 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 TMED6Q8WW62 240 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 RAB24Q969Q5 203 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 C20orf173Q96LM9 149 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 OR51M1Q9H341 326 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms