RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 AMTNQ6UX39 209 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 CYP2G1PQ6ZSU1 146 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 TMEM144Q7Z5S9 345 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 RNF182Q8N6D2 247 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 POM121L12Q8N7R1 296 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 OR4D5Q8NGN0 318 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 NIPSNAP3BQ9BS92 247 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 LOC102723971A0A1B0GUV8 181 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 PMS2P5A8MQ11 134 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 H3BRN7 92 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 M0R2N4 97 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 HBE1P02100 147 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 PRM2P04554 102 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 IL5P05113 134 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 P0DMU3 169 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 FAM231AP0DMU4 169 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 FAM231CP0DMU5 169 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.77
VMP1-206ENST00000587945 HTN3P15516 51 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 ANXA7P20073 488 aaKnown RBP10.21□□□□□ -0.77
VMP1-206ENST00000587945 RRAS2P62070 204 aaPredicted RBP10.21□□□□□ -0.77
VMP1-206ENST00000587945 SDHCQ99643 169 aaPredicted RBP10.21□□□□□ -0.77
VMP1-206ENST00000587945 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.77
VMP1-206ENST00000587945 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
VMP1-206ENST00000587945 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.77
VMP1-206ENST00000587945 NAP1L6A6NFF2 107 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 A8MTW9 85 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 IFNA21P01568 189 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 OR4E1P0C645 316 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 METTL15P1P0C7V9 234 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 CNN1P51911 297 aaKnown RBP10.2□□□□□ -0.78
VMP1-206ENST00000587945 RRN3P1Q2M238 152 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 IGF2BP2-AS1Q96M15 143 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 GPR82Q96P67 336 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
VMP1-206ENST00000587945 M0R2Z0 102 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 HYPMO75409 117 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 SCGB1D2O95969 90 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 LINC00869P0C866 280 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 BTCP35070 178 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 RAP2BP61225 183 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 SPINK13Q1W4C9 94 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 C4orf46Q504U0 113 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 OR11H7Q8NGC8 314 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 SMIM8Q96KF7 97 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 UHRF2Q96PU4 802 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 TMEM208Q9BTX3 173 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
VMP1-206ENST00000587945 DYNC1H1Q14204 4646 aaKnown RBP10.19□□□□□ -0.78
VMP1-206ENST00000587945 TEX48A0A1B0GUV7 120 aa10.18□□□□□ -0.78
VMP1-206ENST00000587945 ZNF705GA8MUZ8 300 aaPredicted RBP10.18□□□□□ -0.78
VMP1-206ENST00000587945 ZNF701M0R085 212 aaPredicted RBP10.18□□□□□ -0.78
VMP1-206ENST00000587945 CRXO43186 299 aaPredicted RBP10.18□□□□□ -0.78
VMP1-206ENST00000587945 OR5G3P0C626 314 aa10.18□□□□□ -0.78
VMP1-206ENST00000587945 IAH1Q2TAA2 248 aaPredicted RBP10.18□□□□□ -0.78
VMP1-206ENST00000587945 TMEM14EPQ6UXP3 125 aa10.18□□□□□ -0.78
VMP1-206ENST00000587945 ZNF738Q8NE65 137 aa10.18□□□□□ -0.78
VMP1-206ENST00000587945 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
VMP1-206ENST00000587945 IGLV2-18A0A075B6J9 118 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 DUSP14O95147 198 aaKnown RBP10.17□□□□□ -0.78
VMP1-206ENST00000587945 RPL7P18124 248 aaKnown RBP10.17□□□□□ -0.78
VMP1-206ENST00000587945 S100A7P31151 101 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 DAD1P61803 113 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 DLK1P80370 383 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 SLC38A11Q08AI6 406 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 ARL16Q0P5N6 197 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 PATE2Q6UY27 113 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 BAP18Q8IXM2 172 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 ARL6Q9H0F7 186 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
VMP1-206ENST00000587945 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 RTL8CO15255 209 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 SNRPCP09234 159 aaKnown RBP10.16□□□□□ -0.78
VMP1-206ENST00000587945 PLP1P60201 277 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 SELENOTP62341 195 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 OXA1LQ15070 435 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 LINC00336Q6ZUF6 198 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 ZBTB8BQ8NAP8 495 aaPredicted RBP10.16□□□□□ -0.78
VMP1-206ENST00000587945 OR10P1Q8NGE3 313 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 FAM210BQ96KR6 192 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 NPVFQ9HCQ7 196 aa10.16□□□□□ -0.78
VMP1-206ENST00000587945 RCL1Q9Y2P8 373 aaKnown RBP10.16□□□□□ -0.78
VMP1-206ENST00000587945 A0A1B0GVY2 172 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 CENPXA8MT69 81 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 CCSO14618 274 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 INSP01308 110 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 IL7P13232 177 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 CXCL3P19876 107 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 AZU1P20160 251 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 RHOBP62745 196 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 HIST1H1AQ02539 215 aaPredicted RBP10.15□□□□□ -0.78
VMP1-206ENST00000587945 MITD1Q8WV92 249 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 ARV1Q9H2C2 271 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 MGAT4CQ9UBM8 478 aa10.15□□□□□ -0.78
VMP1-206ENST00000587945 A0A087X0K7 114 aa10.14□□□□□ -0.79
VMP1-206ENST00000587945 FNDC10F2Z333 226 aa10.14□□□□□ -0.79
VMP1-206ENST00000587945 BOLA2-SMG1P6H3BVE0 249 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms