RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
DNMT1-213ENST00000587604 PAIP2BQ9ULR5 123 aaKnown RBP9.87□□□□□ -0.83
DNMT1-213ENST00000587604 TRAV8-2A0A0B4J237 113 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 F5H768 121 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 MED6O75586 246 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 SLC25A6P12236 298 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 ORM2P19652 201 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 RPP30P78346 268 aaKnown RBP9.86□□□□□ -0.83
DNMT1-213ENST00000587604 SPCS2Q15005 226 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 BPIFCQ8NFQ6 507 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 CIB3Q96Q77 187 aaPredicted RBP9.86□□□□□ -0.83
DNMT1-213ENST00000587604 TMEM147Q9BVK8 224 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 RSL24D1Q9UHA3 163 aaKnown RBP9.86□□□□□ -0.83
DNMT1-213ENST00000587604 LRP1BQ9NZR2 4599 aa9.86□□□□□ -0.83
DNMT1-213ENST00000587604 PLAC8L1A1L4L8 177 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 PRSS46E5RG02 174 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 NUDT3O95989 172 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 AZU1P20160 251 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 GATA2P23769 480 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-213ENST00000587604 CCL18P55774 89 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 FCN2Q15485 313 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 TMEM128Q5BJH2 165 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 IGFL4Q6B9Z1 124 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 TMEM182Q6ZP80 229 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-213ENST00000587604 LRTM2Q8N967 370 aa9.85□□□□□ -0.83
DNMT1-213ENST00000587604 CBY3A6NI87 242 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 ATP5G1P05496 136 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 ATP5G3P48201 142 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 FGL1Q08830 312 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 TMED4Q7Z7H5 227 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 BAP18Q8IXM2 172 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 RNF182Q8N6D2 247 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 LINC00588Q9Y4M8 146 aa9.84□□□□□ -0.83
DNMT1-213ENST00000587604 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 BOLA2-SMG1P6H3BVE0 249 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 SYNGR2O43760 224 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 TAS2R60P59551 318 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 TMEM256Q8N2U0 113 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 LINC01587Q99440 93 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 SOSTQ9BQB4 213 aa9.83□□□□□ -0.84
DNMT1-213ENST00000587604 SLC25A39Q9BZJ4 359 aaPredicted RBP9.83□□□□□ -0.84
DNMT1-213ENST00000587604 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
DNMT1-213ENST00000587604 WRBO00258 174 aa9.82□□□□□ -0.84
DNMT1-213ENST00000587604 RPL7P18124 248 aaKnown RBP9.82□□□□□ -0.84
DNMT1-213ENST00000587604 AKR1C1Q04828 323 aa9.82□□□□□ -0.84
DNMT1-213ENST00000587604 SPANXN5Q5MJ07 72 aa9.82□□□□□ -0.84
DNMT1-213ENST00000587604 TMEM144Q7Z5S9 345 aa9.82□□□□□ -0.84
DNMT1-213ENST00000587604 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
DNMT1-213ENST00000587604 FABP12A6NFH5 140 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 H3BRN7 92 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 VAMP1P23763 118 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 FAUP35544 74 aaKnown RBP9.81□□□□□ -0.84
DNMT1-213ENST00000587604 RAP2BP61225 183 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 RHOBP62745 196 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 OR8A1Q8NGG7 326 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 RNF141Q8WVD5 230 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 C16orf74Q96GX8 76 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 MRPS26Q9BYN8 205 aaKnown RBP9.81□□□□□ -0.84
DNMT1-213ENST00000587604 Q9H8V8 135 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 PPP1R14DQ9NXH3 145 aa9.81□□□□□ -0.84
DNMT1-213ENST00000587604 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
DNMT1-213ENST00000587604 TIMM8BQ9Y5J9 83 aaPredicted RBP9.81□□□□□ -0.84
DNMT1-213ENST00000587604 HYPMO75409 117 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 SFT2D2O95562 160 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 IL5P05113 134 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 HTN1P15515 57 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 CXCL3P19876 107 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 TNFSF8P32971 234 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 PLP1P60201 277 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-213ENST00000587604 CLINT1Q14677 625 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 ZNF493Q6ZR52 646 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 CYP2G1PQ6ZSU1 146 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 ACOT7LQ6ZUV0 252 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 SSX7Q7RTT5 188 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 Q8N1X5 172 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 RAB2BQ8WUD1 216 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 SLC25A21Q9BQT8 299 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-213ENST00000587604 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 DNAH5Q8TE73 4624 aa9.8□□□□□ -0.84
DNMT1-213ENST00000587604 APOBP04114 4563 aaKnown RBP9.79□□□□□ -0.84
DNMT1-213ENST00000587604 A0A087X0K7 114 aa9.79□□□□□ -0.84
DNMT1-213ENST00000587604 H3BP45 60 aa9.79□□□□□ -0.84
DNMT1-213ENST00000587604 PSG3Q16557 428 aa9.79□□□□□ -0.84
DNMT1-213ENST00000587604 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
DNMT1-213ENST00000587604 BCL7BQ9BQE9 202 aa9.79□□□□□ -0.84
DNMT1-213ENST00000587604 HOXB5P09067 269 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 OR5G3P0C626 314 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 CDKN1BP46527 198 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 TMBIM6P55061 237 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 AP3S2P59780 193 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 SELENOTP62341 195 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 ID3Q02535 119 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 S100A7AQ86SG5 101 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 TOMM5Q8N4H5 51 aa9.78□□□□□ -0.84
DNMT1-213ENST00000587604 LRRC20Q8TCA0 184 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms