RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TMEM182Q6ZP80 229 aaPredicted RBP6.24□□□□□ -1.41
SDF2-204ENST00000587338 ZNF680Q8NEM1 530 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 OR2G3Q8NGZ4 309 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 TMEM190Q8WZ59 177 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 CXorf58Q96LI9 332 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 GINS3Q9BRX5 216 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 RSG1Q9BU20 258 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
SDF2-204ENST00000587338 SH3BGRL3Q9H299 93 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 NPVFQ9HCQ7 196 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 DAZ1Q9NQZ3 744 aaKnown RBP6.24□□□□□ -1.41
SDF2-204ENST00000587338 THYN1Q9P016 225 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 IGHV3OR16-8A0A075B7F1 116 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 TRAV10A0A0B4J240 114 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 ZFP92A6NM28 416 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 PRSS46E5RG02 174 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 C17orf112F2Z3M2 114 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 HIST1H1BP16401 226 aaKnown RBP6.23□□□□□ -1.41
SDF2-204ENST00000587338 HLA-DMBP28068 263 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 TFPI2P48307 235 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 RND2P52198 227 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 RAB14P61106 215 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 GAMTQ14353 236 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 Q56UQ5 140 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 FAM74A1Q5RGS3 127 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 PVRIGQ6DKI7 326 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 Q6ZTC4 211 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 ZNF767PQ75MW2 155 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 MAPKAPK5-AS1Q8N8E1 139 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 ZNF502Q8TBZ5 544 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 SCARB1Q8WTV0 552 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 PCNPQ8WW12 178 aaKnown RBP6.23□□□□□ -1.41
SDF2-204ENST00000587338 NPIPB3Q92617 1050 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 GNPNAT1Q96EK6 184 aaPredicted RBP6.23□□□□□ -1.41
SDF2-204ENST00000587338 C20orf24Q9BUV8 137 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 FNDC4Q9H6D8 234 aaPredicted RBP6.23□□□□□ -1.41
SDF2-204ENST00000587338 RFNGQ9Y644 331 aa6.23□□□□□ -1.41
SDF2-204ENST00000587338 IGLV11-55A0A075B6I3 123 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 TGOLN2O43493 480 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 ZNF207O43670 478 aaKnown RBP6.22□□□□□ -1.41
SDF2-204ENST00000587338 OR10J1P30954 320 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 ADMP35318 185 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 CAMLGP49069 296 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 VWC2Q2TAL6 325 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 Q8NAQ8 132 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 PHYHIPLQ96FC7 376 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 ARV1Q9H2C2 271 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 HRH4Q9H3N8 390 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 WDR83OSQ9Y284 106 aa6.22□□□□□ -1.41
SDF2-204ENST00000587338 IGKV3-7A0A075B6H7 116 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 IGLV2-18A0A075B6J9 118 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 IGHV4-28A0A0C4DH34 117 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 OR2T8A6NH00 312 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 FNDC10F2Z333 226 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 I3L2K1 104 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 K7EIM0 57 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 AGPAT2O15120 278 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 GNG7O60262 68 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 MPDU1O75352 247 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 SEC11BP0C7V7 166 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 P0DMU3 169 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 FAM231AP0DMU4 169 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 FAM231CP0DMU5 169 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 SPP1P10451 314 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 NPBWR1P48145 328 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 MFAP4P55083 255 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 KLK9Q2XQG4 91 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 FFAR4Q5NUL3 377 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 MIC13Q5XKP0 118 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 CYP2G1PQ6ZSU1 146 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 TMEM144Q7Z5S9 345 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 MGST2Q99735 147 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 PARD6GQ9BYG4 376 aaPredicted RBP6.21□□□□□ -1.42
SDF2-204ENST00000587338 MRPL36Q9P0J6 103 aaKnown RBP6.21□□□□□ -1.42
SDF2-204ENST00000587338 KLK9Q9UKQ9 250 aa6.21□□□□□ -1.42
SDF2-204ENST00000587338 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
SDF2-204ENST00000587338 RGS13O14921 159 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 AMBPP02760 352 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 RBMY1A1P0DJD3 496 aaKnown RBP6.2□□□□□ -1.42
SDF2-204ENST00000587338 RBMY1CP0DJD4 496 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 GATA2P23769 480 aaPredicted RBP6.2□□□□□ -1.42
SDF2-204ENST00000587338 SULT1A2P50226 295 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 RBMY1FQ15415 496 aaKnown RBP6.2□□□□□ -1.42
SDF2-204ENST00000587338 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 ACOT6Q3I5F7 207 aaPredicted RBP6.2□□□□□ -1.42
SDF2-204ENST00000587338 GBGT1Q8N5D6 347 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 BPIFCQ8NFQ6 507 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 OR4X1Q8NH49 305 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 FAM213BQ8TBF2 198 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 RNF2Q99496 336 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 PSMG3Q9BT73 122 aaPredicted RBP6.2□□□□□ -1.42
SDF2-204ENST00000587338 CHRDL1Q9BU40 450 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 KCNIP2Q9NS61 270 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms