RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 VAMP2P63027 116 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 TMEM252Q8N6L7 170 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 C2CD4CQ8TF44 421 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 GGACTQ9BVM4 153 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 EPPK1P58107 5090 aaKnown RBP12.39□□□□□ -0.43
ITGB4-213ENST00000584939 IGKV3-20P01619 116 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 ORM2P19652 201 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 SLC38A11Q08AI6 406 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 VWC2Q2TAL6 325 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 LGALS9CQ6DKI2 356 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 FOXI2Q6ZQN5 318 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 BPIFCQ8NFQ6 507 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
ITGB4-213ENST00000584939 OR5AC2Q9NZP5 309 aa12.39□□□□□ -0.43
ITGB4-213ENST00000584939 ZNF98A6NK75 572 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 ISLRO14498 428 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 BCAP31P51572 246 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 CAV2P51636 162 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 MGST2Q99735 147 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 SLC25A32Q9H2D1 315 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 SLC45A2Q9UMX9 530 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 ALG5Q9Y673 324 aa12.38□□□□□ -0.43
ITGB4-213ENST00000584939 IGLL5B9A064 214 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 GALR1P47211 349 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 SULT1A1P50225 295 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 FXYD7P58549 80 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 TEPPQ6URK8 271 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 RPP25LQ8N5L8 163 aaKnown RBP12.37□□□□□ -0.43
ITGB4-213ENST00000584939 OR1B1Q8NGR6 318 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 RSG1Q9BU20 258 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 MGAT4CQ9UBM8 478 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 WDR83OSQ9Y284 106 aa12.37□□□□□ -0.43
ITGB4-213ENST00000584939 H3BRN7 92 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 AGPAT2O15120 278 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 LINC00869P0C866 280 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 PVALBP20472 110 aaPredicted RBP12.36□□□□□ -0.43
ITGB4-213ENST00000584939 MEOX2P50222 304 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 TCTAP57738 103 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 SELENOTP62341 195 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 NHLH2Q02577 135 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 SAMD13Q5VXD3 122 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 Q6ZTC4 211 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 OR4B1Q8NGF8 309 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 PPP1R1CQ8WVI7 109 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
ITGB4-213ENST00000584939 F6UB75 175 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 SSNA1O43805 119 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 CXCL3P19876 107 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 S100A7P31151 101 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 LRRC37A5PQ49AS3 106 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 SPATA31B1PQ5VZV4 182 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 EBLN2Q6P2I7 272 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 C20orf173Q96LM9 149 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 SCRT1Q9BWW7 348 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 SLC25A39Q9BZJ4 359 aaPredicted RBP12.35□□□□□ -0.43
ITGB4-213ENST00000584939 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 DOK5Q9P104 306 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
ITGB4-213ENST00000584939 BIRC6Q9NR09 4857 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 CYCSP99999 105 aaKnown RBP12.34□□□□□ -0.43
ITGB4-213ENST00000584939 FAM78BQ5VT40 261 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-213ENST00000584939 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 GPR82Q96P67 336 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 UHRF2Q96PU4 802 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 SHANK2-AS3Q9BTD1 123 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 APLNQ9ULZ1 77 aa12.34□□□□□ -0.43
ITGB4-213ENST00000584939 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 A0A0J9YX75 114 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 ZNF705FA8MVS1 300 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-213ENST00000584939 E5RGE8 158 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 MRPS12O15235 138 aaKnown RBP12.33□□□□□ -0.44
ITGB4-213ENST00000584939 HYPMO75409 117 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 MPC2O95563 127 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 ZNF705DP0CH99 300 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-213ENST00000584939 ZNF705BP0CI00 300 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-213ENST00000584939 S100A11P31949 105 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 PRR20EP86478 221 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 PRR20CP86479 221 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 PRR20DP86480 221 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 PRR20BP86481 221 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 PRR20AP86496 221 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 PSG9Q00887 426 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 C12orf74Q32Q52 190 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 ZNF767PQ75MW2 155 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 CHAC2Q8WUX2 184 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 NEU1Q99519 415 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 SLC35B3Q9H1N7 401 aa12.33□□□□□ -0.44
ITGB4-213ENST00000584939 UQCC1Q9NVA1 299 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms