RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
SMARCE1-218ENST00000582955 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
SMARCE1-218ENST00000582955 SLC25A31Q9H0C2 315 aa9.26□□□□□ -0.93
SMARCE1-218ENST00000582955 ARV1Q9H2C2 271 aa9.26□□□□□ -0.93
SMARCE1-218ENST00000582955 LOC100996750A0A140TA64 210 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 H0YIZ8 118 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 COX7A2P2O60397 106 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 PET100P0DJ07 73 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 PSMB3P49720 205 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 MEOX2P50222 304 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 EWSR1Q01844 656 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 NHLH2Q02577 135 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 ATP6V1FQ16864 119 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 VWC2Q2TAL6 325 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 PXDC1Q5TGL8 231 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 SAMD13Q5VXD3 122 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 KRTAP4-6Q9BYQ5 205 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 WDR83OSQ9Y284 106 aa9.25□□□□□ -0.93
SMARCE1-218ENST00000582955 ISLRO14498 428 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 SOCS3O14543 225 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 SPP1P10451 314 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 RPL7P18124 248 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 ATF4P18848 351 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 FGF7P21781 194 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 FGL1Q08830 312 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 MIC13Q5XKP0 118 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 MORN3Q6PF18 240 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 PATE2Q6UY27 113 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 Q6ZRG5 221 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 OR5C1Q8NGR4 320 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 RNF24Q9Y225 148 aa9.24□□□□□ -0.93
SMARCE1-218ENST00000582955 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 A0A0J9YWU9 116 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 MPC2O95563 127 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 DEFB1P60022 68 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 CLINT1Q14677 625 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 LINC00305Q7Z4B0 112 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 AGRNO00468 2067 aa9.23□□□□□ -0.93
SMARCE1-218ENST00000582955 ELOA3CA0A087WX78 387 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 H3BMM0 161 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 C4BPBP20851 252 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 OPCMLQ14982 345 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 TMEM41BQ5BJD5 291 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 OR11H2Q8NH07 326 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 THAP6Q8TBB0 222 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 RARRES2Q99969 163 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 RNF126Q9BV68 326 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 MED28Q9H204 178 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 SAV1Q9H4B6 383 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 SLC39A9Q9NUM3 307 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 PXMP4Q9Y6I8 212 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
SMARCE1-218ENST00000582955 MPDU1O75352 247 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 CXCL3P19876 107 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 RPL29P47914 159 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 B2MP61769 119 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 NUTF2P61970 127 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 RGS21Q2M5E4 152 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 IGFL4Q6B9Z1 124 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 FOXI2Q6ZQN5 318 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 OR4B1Q8NGF8 309 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 IL17DQ8TAD2 202 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 LRRC20Q8TCA0 184 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 TMEM37Q8WXS4 190 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 C17orf77Q96MU5 243 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 PFDN5Q99471 154 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 DNAJC4Q9NNZ3 241 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 CLEC5AQ9NY25 188 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 MBD2Q9UBB5 411 aa9.21□□□□□ -0.94
SMARCE1-218ENST00000582955 A0A087X0K7 114 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 F6UB75 175 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 GIG44P09565 113 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 RPL12P30050 165 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 FCN2Q15485 313 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 BPIFA4PQ86YQ2 179 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 RNF182Q8N6D2 247 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 NPCDR1Q9BY65 106 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 HSPB11Q9Y547 144 aa9.2□□□□□ -0.94
SMARCE1-218ENST00000582955 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 FXYD7P58549 80 aa9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 SPATA31B1PQ5VZV4 182 aa9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 ZNF709Q8N972 641 aa9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 OR11H7Q8NGC8 314 aa9.19□□□□□ -0.94
SMARCE1-218ENST00000582955 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms