RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-222	ENST00000582594	CD59	P13987	128 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	VSTM2A	Q8TAG5	236 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CEP250	Q9BV73	2442 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	IGLV3-9	A0A075B6K5	115 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594		A0A1W2PRD5	423 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594		A0A1W2PRF3	423 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594		A0A1W2PRM7	423 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	ZNF785	A8K8V0	405 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	GATA4	P43694	442 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	PRSS57	Q6UWY2	283 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	WFDC3	Q8IUB2	231 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	ZADH2	Q8N4Q0	377 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	LINC00574	Q9H8X3	128 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	HIGD1A	Q9Y241	93 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	NPIPB6	E9PJ23	425 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	OVOL3	O00110	214 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	IGLV2-11	P01706	119 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TNFRSF1A	P19438	455 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	VMA21	Q3ZAQ7	101 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TM4SF20	Q53R12	229 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	PIP4P2	Q8N4L2	257 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	FER1L6-AS1	Q8NA97	138 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	OR10AG1	Q8NH19	301 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TRGV9	Q99603	122 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	THYN1	Q9P016	225 aa		7.62	□□□□□ -1.19
PPP4R1-222	ENST00000582594	MAP1B	P46821	2468 aa	Known RBP	7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	INS-IGF2	F8WCM5	200 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	RBP4	P02753	201 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	MRGPRG-AS1	Q2M3A8	158 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	LYPD2	Q6UXB3	125 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	C8orf46	Q8TAG6	207 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	FGF6	P10767	208 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CSN1S1	P47710	185 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CACNG7	P62955	275 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	FAM27E3	Q08E93	113 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	RIG	Q13278	110 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	OTOR	Q9NRC9	128 aa		7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594	F11R	Q9Y624	299 aa	Known RBP	7.61	□□□□□ -1.19
PPP4R1-222	ENST00000582594		D6R8Y8	96 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	RPL27A	P46776	148 aa	Known RBP	7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	KIR3DS1	Q14943	382 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TIMM23B	Q5SRD1	257 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	OR4A5	Q8NH83	315 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594		A0A096LNJ9	63 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TMEM213	A2RRL7	107 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CRYGC	P07315	174 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	C8orf49	Q96NF6	230 aa		7.6	□□□□□ -1.19
PPP4R1-222	ENST00000582594	C9orf118	A6NHY6	69 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	SMKR1	H3BMG3	65 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	NMU	P48645	174 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	SEC11A	P67812	179 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CCL17	Q92583	94 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	SIGLEC8	Q9NYZ4	499 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	KALRN	O60229	2985 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594		M0R3E3	92 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CDX4	O14627	284 aa	Predicted RBP	7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	ZNF883	P0CG24	379 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	CRIP1	P50238	77 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TEX36	Q5VZQ5	186 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	UFSP1	Q6NVU6	142 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	GTF2H5	Q6ZYL4	71 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	AMN1	Q8IY45	258 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594		S4R3C0	116 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	MALRD1	Q5VYJ5	2156 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	DMXL2	Q8TDJ6	3036 aa		7.59	□□□□□ -1.19
PPP4R1-222	ENST00000582594	TRAV17	A0A0B4J275	112 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594		A0A0G2JLM5	398 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	TMEM238	C9JI98	176 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	TMEM30B	Q3MIR4	351 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	PCP2	Q8IVA1	136 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	FAM169B	Q8N8A8	192 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	TMEM186	Q96B77	213 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	PSG8	Q9UQ74	426 aa		7.59	□□□□□ -1.2
PPP4R1-222	ENST00000582594	LAMA5	O15230	3695 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594		A1L4Q6	167 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594		A6NDN8	102 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594		H3BRM9	83 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594	TMEM133	Q9H2Q1	129 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594	TPR	P12270	2363 aa	Known RBP	7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594	C16orf54	Q6UWD8	224 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594	LYZL1	Q6UWQ5	148 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594	PRELID3A	Q96N28	172 aa		7.58	□□□□□ -1.2
PPP4R1-222	ENST00000582594	PCNX1	Q96RV3	2341 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594		K7EP34	96 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	SMAD7	O15105	426 aa	Known RBP	7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	CD40	P25942	277 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	PAX2	Q02962	417 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	MEF2C	Q06413	473 aa	Predicted RBP	7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	DEFB109B	Q30KR1	87 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	OR2K2	Q8NGT1	345 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	C18orf15	Q96N68	181 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	RASL11B	Q9BPW5	248 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	MBD3L3	A6NE82	208 aa	Predicted RBP	7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	MBD3L5	A6NJ08	208 aa	Predicted RBP	7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	NDUFB3	O43676	98 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	APOBEC3A	P31941	199 aa	Predicted RBP	7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	BOD1L2	Q8IYS8	172 aa		7.57	□□□□□ -1.2
PPP4R1-222	ENST00000582594	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.57	□□□□□ -1.2

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