RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 LOC102723971A0A1B0GUV8 181 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 A6NDX4 124 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 I3L2K1 104 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 HMGB3O15347 200 aaKnown RBP7.92□□□□□ -1.14
SS18-221ENST00000582448 GNG7O60262 68 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 SNAPINO95295 136 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 IGHV3-48P01763 117 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 S100A7P31151 101 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 CEBPGP53567 150 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 MFAP2P55001 183 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 MFAP4P55083 255 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 AKIRIN2Q53H80 203 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 SOHLH1Q5JUK2 328 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 C10orf113Q5VZT2 155 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 OR5T1Q8NG75 326 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 SUN5Q8TC36 379 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 TXNDC17Q9BRA2 123 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 PRSS22Q9GZN4 317 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 DNAJC4Q9NNZ3 241 aa7.92□□□□□ -1.14
SS18-221ENST00000582448 CARHSP1Q9Y2V2 147 aaKnown RBP7.92□□□□□ -1.14
SS18-221ENST00000582448 IGLV11-55A0A075B6I3 123 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 IGKV1OR2-108A0A075B7D4 117 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 IGHV3-21A0A0B4J1V1 117 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 TRAV41A0A0B4J266 112 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 ATP6V0E1O15342 81 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 CLN5O75503 358 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 OR5G3P0C626 314 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 STAG3L2P0CL84 134 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
SS18-221ENST00000582448 KRTAP10-11P60412 298 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 NDPQ00604 133 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 TMEM95Q3KNT9 176 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 Q56UQ5 140 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 GCSAMLQ5JQS6 135 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 PQLC2Q6ZP29 291 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 C19orf35Q6ZS72 473 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 SSX7Q7RTT5 188 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 STXBP6Q8NFX7 210 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 TXN2Q99757 166 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 HSPB9Q9BQS6 159 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 TMEM167BQ9NRX6 74 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 C21orf62Q9NYP8 219 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
SS18-221ENST00000582448 DNAH3Q8TD57 4116 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 K7EIM0 57 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 OR7C2O60412 319 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 HYPMO75409 117 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 RD3LP0DJH9 198 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 C8orf88P0DMB2 117 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 ORM2P19652 201 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 BLCAPP62952 87 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 MEF2BQ02080 365 aaPredicted RBP7.9□□□□□ -1.14
SS18-221ENST00000582448 ZNF90Q03938 601 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 ASPHD1Q5U4P2 390 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 NECAP1Q8NC96 275 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 OR5AU1Q8NGC0 362 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 OR1B1Q8NGR6 318 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 VN1R17PQ8TDU5 208 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 Q8WTZ3 238 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 RARRES2Q99969 163 aa7.9□□□□□ -1.14
SS18-221ENST00000582448 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.14
SS18-221ENST00000582448 AP4M1O00189 453 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 PDE6DO43924 150 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
SS18-221ENST00000582448 OR2J3O76001 311 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 NUDT3O95989 172 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 SRP19P09132 144 aaKnown RBP7.89□□□□□ -1.15
SS18-221ENST00000582448 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
SS18-221ENST00000582448 GCHFRP30047 84 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 KHDC1LQ5JSQ8 128 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 CST9LP1Q5W188 147 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 ZNF575Q86XF7 245 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 UHRF2Q96PU4 802 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 NIPSNAP3BQ9BS92 247 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 DOK5Q9P104 306 aa7.89□□□□□ -1.15
SS18-221ENST00000582448 IGKV1D-37A0A075B6S9 117 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 C11orf94C9JXX5 98 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 F6UZH7 168 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 H3BUA1 57 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 M0R036 132 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 NUPL2O15504 423 aaKnown RBP7.88□□□□□ -1.15
SS18-221ENST00000582448 PAGE4O60829 102 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 TOMM40O96008 361 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 IGHG2P01859 326 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 IGF1P05019 195 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
SS18-221ENST00000582448 YPEL3P61236 119 aaPredicted RBP7.88□□□□□ -1.15
SS18-221ENST00000582448 LYZP61626 148 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 RHOGP84095 191 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 ATP5G2Q06055 141 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 TIGITQ495A1 244 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 FAM74A3Q4VXF1 159 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms