RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TMED3Q9Y3Q3 217 aa7.48□□□□□ -1.21
RFFL-209ENST00000581265 NACAE9PAV3 2078 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 TRAV8-2A0A0B4J237 113 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 LYRM9A8MSI8 78 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 SYNGR2O43760 224 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 ORM2P19652 201 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 GATA2P23769 480 aaPredicted RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 TSPOP30536 169 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 FAUP35544 74 aaKnown RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 TMED4Q7Z7H5 227 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 Q8N1X5 172 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 OR11H7Q8NGC8 314 aa7.47□□□□□ -1.21
RFFL-209ENST00000581265 SLC25A21Q9BQT8 299 aaPredicted RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 PAIP2BQ9ULR5 123 aaKnown RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
RFFL-209ENST00000581265 ZNF705GA8MUZ8 300 aaPredicted RBP7.46□□□□□ -1.22
RFFL-209ENST00000581265 WRBO00258 174 aa7.46□□□□□ -1.22
RFFL-209ENST00000581265 PRM2P04554 102 aa7.46□□□□□ -1.22
RFFL-209ENST00000581265 VAMP1P23763 118 aa7.46□□□□□ -1.22
RFFL-209ENST00000581265 AP3S2P59780 193 aa7.46□□□□□ -1.22
RFFL-209ENST00000581265 TMEM144Q7Z5S9 345 aa7.46□□□□□ -1.22
RFFL-209ENST00000581265 TMEM147Q9BVK8 224 aa7.46□□□□□ -1.22
RFFL-209ENST00000581265 M0R2Z0 102 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 SFT2D2O95562 160 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 INSP01308 110 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 ID3Q02535 119 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 SPINK13Q1W4C9 94 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 IGFL4Q6B9Z1 124 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 TOMM5Q8N4H5 51 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 DEDD2Q8WXF8 326 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 TRIM63Q969Q1 353 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
RFFL-209ENST00000581265 STRAPQ9Y3F4 350 aaKnown RBP7.45□□□□□ -1.22
RFFL-209ENST00000581265 PLAC8L1A1L4L8 177 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 CBY3A6NI87 242 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 H3BRN7 92 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 IL5P05113 134 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 HOXB5P09067 269 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 RPL7P18124 248 aaKnown RBP7.44□□□□□ -1.22
RFFL-209ENST00000581265 AZU1P20160 251 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 PLP1P60201 277 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 AKR1C1Q04828 323 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 PPP1R1AQ13522 171 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 ACOT7LQ6ZUV0 252 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 RNF182Q8N6D2 247 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 MCFD2Q8NI22 146 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 ATG101Q9BSB4 218 aa7.44□□□□□ -1.22
RFFL-209ENST00000581265 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
RFFL-209ENST00000581265 NBDYA0A0U1RRE5 68 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 F5H768 121 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 H3BMQ9 156 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 BOLA2-SMG1P6H3BVE0 249 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 HYPMO75409 117 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 ATP5G1P05496 136 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 CXCL3P19876 107 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 ATP5G3P48201 142 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 TAS2R60P59551 318 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 RAP2BP61225 183 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 SELENOTP62341 195 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 FGL1Q08830 312 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 FCN2Q15485 313 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 PYDC2Q56P42 97 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 CYP2G1PQ6ZSU1 146 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 BAP18Q8IXM2 172 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 TMEM256Q8N2U0 113 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 OR8A1Q8NGG7 326 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 LINC01587Q99440 93 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 HIGD1AQ9Y241 93 aa7.43□□□□□ -1.22
RFFL-209ENST00000581265 TRAV12-2A0A075B6T6 113 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 A0A087X0K7 114 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 PMS2P5A8MQ11 134 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 H3BP45 60 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 CCL18P55774 89 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 UBE2MP61081 183 aaKnown RBP7.42□□□□□ -1.22
RFFL-209ENST00000581265 POLR2GP62487 172 aaKnown RBP eCLIP7.42□□□□□ -1.22
RFFL-209ENST00000581265 TNP2Q05952 138 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 PSG3Q16557 428 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 S100A7AQ86SG5 101 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 V9GYH0 126 aa7.42□□□□□ -1.22
RFFL-209ENST00000581265 FNDC10F2Z333 226 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 K7EPK0 472 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 NUDT3O95989 172 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 OR5G3P0C626 314 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 LINC00869P0C866 280 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 RHOBP62745 196 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
RFFL-209ENST00000581265 ZNF493Q6ZR52 646 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 C6orf223Q8N319 242 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 SMIM8Q96KF7 97 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 UHRF2Q96PU4 802 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms