RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 DISC1C4P0D8 188 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 BOLA2-SMG1P6H3BVE0 249 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 EREGO14944 169 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 M6PRP20645 277 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 RHOBP62745 196 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 FGL1Q08830 312 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 SMCO1Q147U7 214 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 ESRGQ1W209 222 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 ZNF493Q6ZR52 646 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 RNF182Q8N6D2 247 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 RXFP4Q8TDU9 374 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 FRZBQ92765 325 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 IL22RA2Q969J5 263 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 GPR82Q96P67 336 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 UPK3BQ9BT76 320 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 SLC25A39Q9BZJ4 359 aaPredicted RBP6.88□□□□□ -1.31
RFFL-208ENST00000581039 VCX3AQ9NNX9 186 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
RFFL-208ENST00000581039 EXTL2Q9UBQ6 330 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
RFFL-208ENST00000581039 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 ADAP1O75689 374 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 ORM2P19652 201 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 VBP1P61758 197 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 NCS1P62166 190 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 RAB11AP62491 216 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 HIST1H1AQ02539 215 aaPredicted RBP6.87□□□□□ -1.31
RFFL-208ENST00000581039 Q5VSD8 79 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 FAAP20Q6NZ36 180 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 OR1S1Q8NH92 325 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 ZNF586Q9NXT0 402 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 PAIP2BQ9ULR5 123 aaKnown RBP6.87□□□□□ -1.31
RFFL-208ENST00000581039 GPR132Q9UNW8 380 aa6.87□□□□□ -1.31
RFFL-208ENST00000581039 IGKV1OR2-108A0A075B7D4 117 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 ZNF701M0R085 212 aaPredicted RBP6.86□□□□□ -1.31
RFFL-208ENST00000581039 AKR1C4P17516 323 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 XGP55808 180 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 LYZL2Q7Z4W2 148 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 THAP8Q8NA92 274 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 BPIFCQ8NFQ6 507 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 TMEM263Q8WUH6 116 aaKnown RBP6.86□□□□□ -1.31
RFFL-208ENST00000581039 AP3S1Q92572 193 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
RFFL-208ENST00000581039 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
RFFL-208ENST00000581039 FAT1Q14517 4588 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 A0A0B4J2A0 478 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 H3BNG1 76 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 H7BYZ3 331 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 ATP6V1G2O95670 118 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 IFNA5P01569 189 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 LINC00315P59091 139 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 SSBP1Q04837 148 aaKnown RBP6.85□□□□□ -1.31
RFFL-208ENST00000581039 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 CCDC28AQ8IWP9 274 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 OR8A1Q8NGG7 326 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 LRRC20Q8TCA0 184 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
RFFL-208ENST00000581039 PRRT1Q99946 306 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 SHPKQ9UHJ6 478 aa6.85□□□□□ -1.31
RFFL-208ENST00000581039 A0A087WXM4 84 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 GAGE12BA1L429 117 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 GAGE7O76087 117 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 RLN2P04090 185 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 GAGE12FP0CL80 117 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 GAGE12GP0CL81 117 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 GAGE12IP0CL82 117 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 AKAIN1P0CW23 69 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 RPL7P18124 248 aaKnown RBP6.84□□□□□ -1.31
RFFL-208ENST00000581039 HOXA5P20719 270 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 GATA2P23769 480 aaPredicted RBP6.84□□□□□ -1.31
RFFL-208ENST00000581039 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFFL-208ENST00000581039 CDKN1BP46527 198 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 ERVFC1-1P60608 527 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 RPP30P78346 268 aaKnown RBP6.84□□□□□ -1.31
RFFL-208ENST00000581039 TMEM182Q6ZP80 229 aaPredicted RBP6.84□□□□□ -1.31
RFFL-208ENST00000581039 SCGB3A2Q96PL1 93 aa6.84□□□□□ -1.31
RFFL-208ENST00000581039 IAPPP10997 89 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 ANXA3P12429 323 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 CXCL3P19876 107 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 RAP2BP61225 183 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 SRPXP78539 464 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 MRPS10P82664 201 aaKnown RBP6.83□□□□□ -1.32
RFFL-208ENST00000581039 PSG3Q16557 428 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
RFFL-208ENST00000581039 CLVS1Q8IUQ0 354 aaPredicted RBP6.83□□□□□ -1.32
RFFL-208ENST00000581039 LINC00612Q8N6U2 182 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 OR51S1Q8NGJ8 323 aa6.83□□□□□ -1.32
RFFL-208ENST00000581039 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
RFFL-208ENST00000581039 SRRM2Q9UQ35 2752 aaKnown RBP6.82□□□□□ -1.32
RFFL-208ENST00000581039 PIGBOS1A0A0B4J2F0 54 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 SNURFLB1AK76 121 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 SIVA1O15304 175 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 HYPMO75409 117 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 MED6O75586 246 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms