RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 MIC13Q5XKP0 118 aa9.71□□□□□ -0.86
NUP85-215ENST00000580879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.71□□□□□ -0.86
NUP85-215ENST00000580879 PPP1R1CQ8WVI7 109 aa9.71□□□□□ -0.86
NUP85-215ENST00000580879 C16orf92Q96LL3 132 aa9.71□□□□□ -0.86
NUP85-215ENST00000580879 ARV1Q9H2C2 271 aa9.71□□□□□ -0.86
NUP85-215ENST00000580879 SEPSECSQ9HD40 501 aaKnown RBP9.71□□□□□ -0.86
NUP85-215ENST00000580879 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 COX7A2P2O60397 106 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 IGKV3-20P01619 116 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 GIG44P09565 113 aaPredicted RBP9.7□□□□□ -0.86
NUP85-215ENST00000580879 FGF7P21781 194 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 S100A7P31151 101 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 PSMB3P49720 205 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 FGL1Q08830 312 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 RAB31Q13636 194 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 IGFL4Q6B9Z1 124 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 C20orf173Q96LM9 149 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 CLEC5AQ9NY25 188 aa9.7□□□□□ -0.86
NUP85-215ENST00000580879 F6UB75 175 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 H3BMM0 161 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 ISLRO14498 428 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 MPC2O95563 127 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 SNRPCP09234 159 aaKnown RBP9.69□□□□□ -0.86
NUP85-215ENST00000580879 ATF4P18848 351 aaPredicted RBP9.69□□□□□ -0.86
NUP85-215ENST00000580879 CXCL3P19876 107 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 CLINT1Q14677 625 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 MORN5Q5VZ52 161 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 LINC00305Q7Z4B0 112 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
NUP85-215ENST00000580879 OR5C1Q8NGR4 320 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 OR11H2Q8NH07 326 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 THAP6Q8TBB0 222 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 TMEM37Q8WXS4 190 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 GPR82Q96P67 336 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 RARRES2Q99969 163 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 RNF126Q9BV68 326 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 SLC25A31Q9H0C2 315 aa9.69□□□□□ -0.86
NUP85-215ENST00000580879 SPP1P10451 314 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 HLA-DRB4P13762 266 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 RPL7P18124 248 aaKnown RBP9.68□□□□□ -0.86
NUP85-215ENST00000580879 MEOX2P50222 304 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 PRR20EP86478 221 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 PRR20CP86479 221 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 PRR20DP86480 221 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 PRR20BP86481 221 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 PRR20AP86496 221 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 OPCMLQ14982 345 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 ATP6V1FQ16864 119 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 PXDC1Q5TGL8 231 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
NUP85-215ENST00000580879 RNF182Q8N6D2 247 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 GATAD1Q8WUU5 269 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 HLA-DRB4X5D2U9 266 aa9.68□□□□□ -0.86
NUP85-215ENST00000580879 RYR3Q15413 4870 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 PRB4P10163 310 aaPredicted RBP9.67□□□□□ -0.86
NUP85-215ENST00000580879 FXYD7P58549 80 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 B2MP61769 119 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 FCN2Q15485 313 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 C10orf113Q5VZT2 155 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 FOXI2Q6ZQN5 318 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 Q6ZRG5 221 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 S100A7AQ86SG5 101 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 SAV1Q9H4B6 383 aaPredicted RBP9.67□□□□□ -0.86
NUP85-215ENST00000580879 SLC39A9Q9NUM3 307 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 MBD2Q9UBB5 411 aa9.67□□□□□ -0.86
NUP85-215ENST00000580879 TRAV5A0A0B4J249 113 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 H3BTX0 84 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 MRPS12O15235 138 aaKnown RBP9.66□□□□□ -0.86
NUP85-215ENST00000580879 DEFB4AO15263 64 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 PET100P0DJ07 73 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 HLA-DMBP28068 263 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 RPL29P47914 159 aaKnown RBP9.66□□□□□ -0.86
NUP85-215ENST00000580879 SAMD13Q5VXD3 122 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 OR11H7Q8NGC8 314 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 OR4B1Q8NGF8 309 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 IL17DQ8TAD2 202 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 NPCDR1Q9BY65 106 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 MED28Q9H204 178 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 DNAJC4Q9NNZ3 241 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 RPRMQ9NS64 109 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 XCL2Q9UBD3 114 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
NUP85-215ENST00000580879 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
NUP85-215ENST00000580879 A0A087X0K7 114 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 A0A0J9YX75 114 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 ZNF705DP0CH99 300 aaPredicted RBP9.65□□□□□ -0.86
NUP85-215ENST00000580879 ZNF705BP0CI00 300 aaPredicted RBP9.65□□□□□ -0.86
NUP85-215ENST00000580879 PMS2P11Q13670 270 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 GCSAMLQ5JQS6 135 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 FAM78BQ5VT40 261 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 EBLN2Q6P2I7 272 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 OR1L4Q8NGR5 311 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 LRRC20Q8TCA0 184 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 SMIM3Q9BZL3 60 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 HSPB11Q9Y547 144 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
NUP85-215ENST00000580879 RPL12P30050 165 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms