RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 UHRF2Q96PU4 802 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 SH3BGRL3Q9H299 93 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 FUT9Q9Y231 359 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 IGHV3OR16-13A0A075B7E8 117 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 IGHV3-74A0A0B4J1X5 117 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 ZNF785A8K8V0 405 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 BOLA2-SMG1P6H3BVE0 249 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 DNASE2O00115 360 aaPredicted RBP10.81□□□□□ -0.68
SKA2-205ENST00000580541 WIPF1O43516 503 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 APOHP02749 345 aaPredicted RBP10.81□□□□□ -0.68
SKA2-205ENST00000580541 CMC4P56277 68 aaPredicted RBP10.81□□□□□ -0.68
SKA2-205ENST00000580541 SIGLEC15Q6ZMC9 328 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 MLXQ9UH92 298 aa10.81□□□□□ -0.68
SKA2-205ENST00000580541 TSPAN4O14817 238 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 ATF4P18848 351 aaPredicted RBP10.8□□□□□ -0.68
SKA2-205ENST00000580541 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
SKA2-205ENST00000580541 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
SKA2-205ENST00000580541 KHDC3LQ587J8 217 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 GCSAMLQ5JQS6 135 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 ADAMTSL5Q6ZMM2 481 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 TMED6Q8WW62 240 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 GLMPQ8WWB7 406 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 SPAG8Q99932 426 aaPredicted RBP10.8□□□□□ -0.68
SKA2-205ENST00000580541 SCRT1Q9BWW7 348 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 SEPSECSQ9HD40 501 aaKnown RBP10.8□□□□□ -0.68
SKA2-205ENST00000580541 RPRMQ9NS64 109 aa10.8□□□□□ -0.68
SKA2-205ENST00000580541 SORL1Q92673 2214 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 TRAV2A0A0B4J234 112 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 TEX46H3BTG2 121 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 RAB2AP61019 212 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 GUK1Q16774 197 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 FAM90A2PQ658T7 463 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 FAM122CQ6P4D5 195 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 PQLC2Q6ZP29 291 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
SKA2-205ENST00000580541 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 OR4C46A6NHA9 309 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 GUCA2BQ16661 112 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 LEMD1Q68G75 181 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 RPP25LQ8N5L8 163 aaKnown RBP10.78□□□□□ -0.68
SKA2-205ENST00000580541 LRRC20Q8TCA0 184 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 OR51M1Q9H341 326 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 NRN1Q9NPD7 142 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 RFNGQ9Y644 331 aa10.78□□□□□ -0.68
SKA2-205ENST00000580541 OR7C2O60412 319 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 CXorf1O96002 111 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.69
SKA2-205ENST00000580541 EDN2P20800 178 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 ID1P41134 155 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 SULT1A2P50226 295 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 MIR17HGQ75NE6 70 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 RNF141Q8WVD5 230 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 PAXXQ9BUH6 204 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 HRH4Q9H3N8 390 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 CLEC5AQ9NY25 188 aa10.77□□□□□ -0.69
SKA2-205ENST00000580541 TRAV5A0A0B4J249 113 aa10.76□□□□□ -0.69
SKA2-205ENST00000580541 IFNA7P01567 189 aa10.76□□□□□ -0.69
SKA2-205ENST00000580541 SNRPD3P62318 126 aaKnown RBP10.76□□□□□ -0.69
SKA2-205ENST00000580541 GTSCR1Q86UQ5 136 aa10.76□□□□□ -0.69
SKA2-205ENST00000580541 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
SKA2-205ENST00000580541 TRRAPQ9Y4A5 3859 aa10.76□□□□□ -0.69
SKA2-205ENST00000580541 ANK2Q01484 3957 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 IGKV3-7A0A075B6H7 116 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 A0A087X0K7 114 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 STAG3L2P0CL84 134 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 STAG3L3P0CL85 134 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 BLOC1S1P78537 153 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 PDE6HQ13956 83 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 SAMD5Q5TGI4 173 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 LCN15Q6UWW0 184 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 FAM213BQ8TBF2 198 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 SLC25A2Q9BXI2 301 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 TMEM167BQ9NRX6 74 aa10.75□□□□□ -0.69
SKA2-205ENST00000580541 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
SKA2-205ENST00000580541 HBE1P02100 147 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 H2AFB1P0C5Y9 115 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 NBEAP1P0C6P0 100 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 GP9P14770 177 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 PSG9Q00887 426 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 EGFEM1PQ0D2K5 195 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 SPATA31B1PQ5VZV4 182 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 TEX261Q6UWH6 196 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 ALKAL2Q6UX46 152 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 SFT2D1Q8WV19 159 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 MBD3L1Q8WWY6 194 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 FAM167A-AS1Q96KT0 104 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 SLC50A1Q9BRV3 221 aa10.74□□□□□ -0.69
SKA2-205ENST00000580541 VWFP04275 2813 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 ZNF705EA8MWA4 302 aaPredicted RBP10.73□□□□□ -0.69
SKA2-205ENST00000580541 ISLRO14498 428 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 ZNF253O75346 499 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 TFPI2P48307 235 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms