RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ARL6Q9H0F7 186 aa10.6□□□□□ -0.71
MKS1-207ENST00000578789 ARV1Q9H2C2 271 aa10.6□□□□□ -0.71
MKS1-207ENST00000578789 ISLRO14498 428 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
MKS1-207ENST00000578789 PET100P0DJ07 73 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 SPP1P10451 314 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 ID1P41134 155 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 PRR20EP86478 221 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 PRR20CP86479 221 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 PRR20DP86480 221 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 PRR20BP86481 221 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 PRR20AP86496 221 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 EWSR1Q01844 656 aaKnown RBP eCLIP10.59□□□□□ -0.71
MKS1-207ENST00000578789 BAXQ07812 192 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 RAB31Q13636 194 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 OPCMLQ14982 345 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 TMEM41BQ5BJD5 291 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
MKS1-207ENST00000578789 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 GATAD1Q8WUU5 269 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 UHRF2Q96PU4 802 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 RNF24Q9Y225 148 aa10.59□□□□□ -0.71
MKS1-207ENST00000578789 A0A087X0K7 114 aa10.58□□□□□ -0.72
MKS1-207ENST00000578789 MPC2O95563 127 aa10.58□□□□□ -0.72
MKS1-207ENST00000578789 GIG44P09565 113 aaPredicted RBP10.58□□□□□ -0.72
MKS1-207ENST00000578789 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
MKS1-207ENST00000578789 RPL7P18124 248 aaKnown RBP10.58□□□□□ -0.72
MKS1-207ENST00000578789 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
MKS1-207ENST00000578789 ELOA3CA0A087WX78 387 aaPredicted RBP10.57□□□□□ -0.72
MKS1-207ENST00000578789 H3BMM0 161 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 COX7A2P2O60397 106 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 MPDU1O75352 247 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 C4BPBP20851 252 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 RPL29P47914 159 aaKnown RBP10.57□□□□□ -0.72
MKS1-207ENST00000578789 NHLH2Q02577 135 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 CASC10Q5T4H9 136 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 MIC13Q5XKP0 118 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 FOXI2Q6ZQN5 318 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 OR5C1Q8NGR4 320 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 TMEM37Q8WXS4 190 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 RSG1Q9BU20 258 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 RNF126Q9BV68 326 aa10.57□□□□□ -0.72
MKS1-207ENST00000578789 MRPS12O15235 138 aaKnown RBP10.56□□□□□ -0.72
MKS1-207ENST00000578789 LYL1P12980 280 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 ATF4P18848 351 aaPredicted RBP10.56□□□□□ -0.72
MKS1-207ENST00000578789 FGF7P21781 194 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 B2MP61769 119 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 Q6ZRG5 221 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 LINC00305Q7Z4B0 112 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 C16orf92Q96LL3 132 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 C20orf173Q96LM9 149 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 CLUHP3Q96NS8 147 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 NPCDR1Q9BY65 106 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 SAV1Q9H4B6 383 aaPredicted RBP10.56□□□□□ -0.72
MKS1-207ENST00000578789 SLC39A9Q9NUM3 307 aa10.56□□□□□ -0.72
MKS1-207ENST00000578789 TRAV8-2A0A0B4J237 113 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 CXCL3P19876 107 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 GDF5OSQ5U4N7 250 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 C10orf113Q5VZT2 155 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 OR1L4Q8NGR5 311 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 PFDN5Q99471 154 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 MBD2Q9UBB5 411 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
MKS1-207ENST00000578789 A0A0J9YWU9 116 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 CXCL2P19875 107 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 DEFB1P60022 68 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 CLINT1Q14677 625 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 FCN2Q15485 313 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 RGS21Q2M5E4 152 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 MORN5Q5VZ52 161 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 OR11H7Q8NGC8 314 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 THAP6Q8TBB0 222 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 RARRES2Q99969 163 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 MED28Q9H204 178 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 DNAJC4Q9NNZ3 241 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 PXMP4Q9Y6I8 212 aa10.54□□□□□ -0.72
MKS1-207ENST00000578789 STARD9Q9P2P6 4700 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 A0A0J9YX75 114 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 A8MTW9 85 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 NUTF2P61970 127 aaKnown RBP10.53□□□□□ -0.72
MKS1-207ENST00000578789 OXA1LQ15070 435 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 BPIFA4PQ86YQ2 179 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 CSNK1G2-AS1Q8NCQ2 148 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 OR11H2Q8NH07 326 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 ATP5SQ99766 215 aa10.53□□□□□ -0.72
MKS1-207ENST00000578789 WDR61Q9GZS3 305 aaKnown RBP10.53□□□□□ -0.72
MKS1-207ENST00000578789 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
MKS1-207ENST00000578789 KMT2CQ8NEZ4 4911 aaKnown RBP10.53□□□□□ -0.72
MKS1-207ENST00000578789 ZNF705EA8MWA4 302 aaPredicted RBP10.52□□□□□ -0.73
MKS1-207ENST00000578789 RPL12P30050 165 aaKnown RBP10.52□□□□□ -0.73
MKS1-207ENST00000578789 FGL1Q08830 312 aa10.52□□□□□ -0.73
MKS1-207ENST00000578789 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
MKS1-207ENST00000578789 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
MKS1-207ENST00000578789 LCN15Q6UWW0 184 aa10.52□□□□□ -0.73
MKS1-207ENST00000578789 ASB13Q8WXK3 278 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms