RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 RAB3BP20337 219 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 NUP62P37198 522 aaPredicted RBP7.13□□□□□ -1.27
GGA3-206ENST00000578773 MEOX2P50222 304 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 TRAM1Q15629 374 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 PSG3Q16557 428 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 ACOT6Q3I5F7 207 aaPredicted RBP7.13□□□□□ -1.27
GGA3-206ENST00000578773 C2orf83Q53S99 150 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 CCDC28AQ8IWP9 274 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 OR5H6Q8NGV6 325 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 RBPMSQ93062 196 aaKnown RBP7.13□□□□□ -1.27
GGA3-206ENST00000578773 SLC25A38Q96DW6 304 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 ENY2Q9NPA8 101 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 MRPL16Q9NX20 251 aaKnown RBP7.13□□□□□ -1.27
GGA3-206ENST00000578773 PPP1R14DQ9NXH3 145 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 PRO0255Q9UI72 69 aa7.13□□□□□ -1.27
GGA3-206ENST00000578773 RRP15Q9Y3B9 282 aaKnown RBP7.13□□□□□ -1.27
GGA3-206ENST00000578773 TRAV5A0A0B4J249 113 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 SCAND1P57086 179 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 C10orf67Q8IYJ2 551 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 SLC24A4Q8NFF2 622 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 RRNAD1Q96FB5 475 aaKnown RBP7.12□□□□□ -1.27
GGA3-206ENST00000578773 LINC01600Q96MT4 127 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 TP53RKQ96S44 253 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 CCDC90BQ9GZT6 254 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 HHLA3Q9XRX5 114 aa7.12□□□□□ -1.27
GGA3-206ENST00000578773 TRAV1-2A0A0B4J238 106 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 LINC00854A0A1B0GVQ3 168 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 SFTA3P0C7M3 94 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 SRIP30626 198 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 CBX5P45973 191 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 GALR1P47211 349 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 AKR1C2P52895 323 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 ASAH1Q13510 395 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 LINC01556Q5JQF7 62 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 RNASEH2CQ8TDP1 164 aaKnown RBP7.11□□□□□ -1.27
GGA3-206ENST00000578773 BLNKQ8WV28 456 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 BORCS5Q969J3 196 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 ST6GAL2Q96JF0 529 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 DNAJC30Q96LL9 226 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 PAXXQ9BUH6 204 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 PDCD10Q9BUL8 212 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 AUNIPQ9H7T9 357 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 ACOT13Q9NPJ3 140 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 RHBDL2Q9NX52 303 aa7.11□□□□□ -1.27
GGA3-206ENST00000578773 PRAC2D3DTV9 90 aa7.1□□□□□ -1.27
GGA3-206ENST00000578773 SPINK4O60575 86 aa7.1□□□□□ -1.27
GGA3-206ENST00000578773 HEYLQ9NQ87 328 aaPredicted RBP7.1□□□□□ -1.27
GGA3-206ENST00000578773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
GGA3-206ENST00000578773 IGKV1OR2-108A0A075B7D4 117 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 ZFP92A6NM28 416 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 CXCL3P19876 107 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 PI3P19957 117 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 MYL9P24844 172 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 MLLT11Q13015 90 aaPredicted RBP7.09□□□□□ -1.27
GGA3-206ENST00000578773 SAMD13Q5VXD3 122 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 TMEM182Q6ZP80 229 aaPredicted RBP7.09□□□□□ -1.27
GGA3-206ENST00000578773 CCDC190Q86UF4 302 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 SPARTQ8N0X7 666 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 MGLLQ99685 303 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 SCN3BQ9NY72 215 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 RPH3ALQ9UNE2 315 aa7.09□□□□□ -1.27
GGA3-206ENST00000578773 SNRPCP09234 159 aaKnown RBP7.08□□□□□ -1.28
GGA3-206ENST00000578773 KLF9Q13886 244 aaPredicted RBP7.08□□□□□ -1.28
GGA3-206ENST00000578773 SP6Q3SY56 376 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 IDNKQ5T6J7 187 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 C22orf42Q6IC83 251 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 Q6ZQT7 251 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 TMEM37Q8WXS4 190 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 C20orf144Q9BQM9 153 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 CACNG5Q9UF02 275 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 TP53TG3Q9ULZ0 132 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 ANAPC10Q9UM13 185 aa7.08□□□□□ -1.28
GGA3-206ENST00000578773 TNFSF8P32971 234 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 SPCS3P61009 180 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 CD300CQ08708 224 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 NMSQ5H8A3 153 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 MORN5Q5VZ52 161 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 PACRGLQ8N7B6 248 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 OR5H2Q8NGV7 314 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 RPUSD4Q96CM3 377 aaKnown RBP7.07□□□□□ -1.28
GGA3-206ENST00000578773 ZNF479Q96JC4 524 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 VGLL1Q99990 258 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 MRPL32Q9BYC8 188 aaKnown RBP7.07□□□□□ -1.28
GGA3-206ENST00000578773 IFT46Q9NQC8 304 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 PFDN2Q9UHV9 154 aa7.07□□□□□ -1.28
GGA3-206ENST00000578773 A0A0U1RQV1 116 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 RNF222A6NCQ9 220 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 HRH1P35367 487 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 ETFRF1Q6IPR1 90 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 TEPPQ6URK8 271 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 LYSMD2Q8IV50 215 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 OR1B1Q8NGR6 318 aa7.06□□□□□ -1.28
GGA3-206ENST00000578773 ZNF431Q8TF32 576 aaPredicted RBP7.06□□□□□ -1.28
GGA3-206ENST00000578773 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
GGA3-206ENST00000578773 A0A0J9YXV3 536 aa7.05□□□□□ -1.28
GGA3-206ENST00000578773 NOTOA8MTQ0 251 aa7.05□□□□□ -1.28
GGA3-206ENST00000578773 CEBPZOSA8MTT3 80 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms