RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 TCEAL2Q9H3H9 227 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-203ENST00000577706 SMDT1Q9H4I9 107 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 SPANXCQ9NY87 97 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 BOKQ9UMX3 212 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-203ENST00000577706 RIMBP3CA6NJZ7 1639 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 RIMBP3BA6NNM3 1639 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 RIMBP3Q9UFD9 1639 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 TRPM3Q9HCF6 1732 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-203ENST00000577706 KIF13BQ9NQT8 1826 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 FRMPD1Q5SYB0 1578 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 N4BP2Q86UW6 1770 aaPredicted RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 RGS12O14924 1447 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF106Q9H2Y7 1883 aaKnown RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 DLC1Q96QB1 1528 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 WDR90Q96KV7 1748 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 TRAV27A0A087WT01 109 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 IGKV2D-26A0A0A0MRZ7 120 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 A0A0G2JMM0 328 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 A0A1W2PPB8 328 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 KIR3DP1A8MWS1 328 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 A8MWV9 139 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 RPL36A-HNRNPH2H7BZ11 118 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 OR1I1O60431 355 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 TIMM17BO60830 172 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 PITX3O75364 302 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF737O75373 536 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 CPSF4O95639 269 aaKnown RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 NPYP01303 97 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 IGLV7-43P04211 117 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 IFNA4P05014 189 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 IGKV4-1P06312 121 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 PRB4P10163 310 aaPredicted RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 HLA-EP13747 358 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 MPV17P39210 176 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 HIST1H4AP62805 103 aaKnown RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF117Q03924 483 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 CDK5R1Q15078 307 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 SS18Q15532 418 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 EIF5AL1Q6IS14 154 aaKnown RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 TMEM136Q6ZRR5 245 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 OR4S1Q8NGB4 309 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 OR5A2Q8NGI9 324 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 MAGOHBQ96A72 148 aaKnown RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 CIB3Q96Q77 187 aaPredicted RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 RETNLBQ9BQ08 111 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 PDCD10Q9BUL8 212 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 BCL2L10Q9HD36 194 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 ASF1BQ9NVP2 202 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 DNAJC15Q9Y5T4 150 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 SOX21Q9Y651 276 aaPredicted RBP1.67□□□□□ -2.14
TOP2A-203ENST00000577706 DSCAMO60469 2012 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 OTOFQ9HC10 1997 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 DYSFO75923 2080 aa1.67□□□□□ -2.14
TOP2A-203ENST00000577706 TRAV7A0A075B6U4 112 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 TRAV1-1A0A0B4J248 108 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 C7orf66A4D0T2 115 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 C7orf71A4D174 169 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 UBFD1O14562 309 aaKnown RBP1.66□□□□□ -2.14
TOP2A-203ENST00000577706 IGLV1-51P01701 117 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 IGHV3-53P01767 116 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 HBDP02042 147 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 CD3DP04234 171 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 S100A8P05109 93 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 IL4P05112 153 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 TRGC1P0CF51 173 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 AKAIN1P0CW23 69 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 GZMBP10144 247 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 HIST1H1DP16402 221 aaKnown RBP1.66□□□□□ -2.14
TOP2A-203ENST00000577706 GNG2P59768 71 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 MYL5Q02045 173 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 KLRD1Q13241 179 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 MIC13Q5XKP0 118 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 TEX261Q6UWH6 196 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 RPS19BP1Q86WX3 136 aaKnown RBP1.66□□□□□ -2.14
TOP2A-203ENST00000577706 CLEC2BQ92478 149 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 MRPS24Q96EL2 167 aaKnown RBP1.66□□□□□ -2.14
TOP2A-203ENST00000577706 PPP3R2Q96LZ3 170 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 OR4C12Q96R67 309 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 OR8B2Q96RD0 313 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 DUSP21Q9H596 190 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 TXNL4BQ9NX01 149 aaKnown RBP1.66□□□□□ -2.14
TOP2A-203ENST00000577706 GRIN2AQ12879 1464 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 SPEF2Q9C093 1822 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 NALCNQ8IZF0 1738 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 SHANK3Q9BYB0 1731 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 ARHGEF11O15085 1522 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 MYOM3Q5VTT5 1437 aa1.66□□□□□ -2.14
TOP2A-203ENST00000577706 NLRC5Q86WI3 1866 aa1.65□□□□□ -2.14
TOP2A-203ENST00000577706 ADGBQ8N7X0 1667 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 ABCC10Q5T3U5 1492 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 A0A1B0GU33 70 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 A0A1B0GW54 56 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 OR2T8A6NH00 312 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 GNRH2O43555 120 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 SLC25A4P12235 298 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 HLA-DRB4P13762 266 aa1.65□□□□□ -2.15
TOP2A-203ENST00000577706 FUSP35637 526 aaKnown RBP eCLIP1.65□□□□□ -2.15
TOP2A-203ENST00000577706 QRFPP83859 136 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms