RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ARRDC1Q8N5I2 433 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 CCDC71LQ8N9Z2 235 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 OR4X1Q8NH49 305 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 ZFAND1Q8TCF1 268 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 DCANP1Q8TF63 244 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 SCRT1Q9BWW7 348 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 CTDSP1Q9GZU7 261 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 TMEM231Q9H6L2 316 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 MSRB1Q9NZV6 116 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 CACNG5Q9UF02 275 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
NUP88-212ENST00000576708 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
NUP88-212ENST00000576708 A0A1W2PS18 150 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 GABARAPH6UMI1 98 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 ATG12O94817 140 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 GABARAPO95166 117 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 CDS2O95674 445 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 CD5P06127 495 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 OR4E1P0C645 316 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 IGLC1P0CG04 106 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 G0S2P27469 103 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 OR10J1P30954 320 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 RPL5P46777 297 aaKnown RBP4.48□□□□□ -1.69
NUP88-212ENST00000576708 TAS2R19P59542 299 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 DHRS2Q13268 280 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 PSMG4Q5JS54 123 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 TMEM268Q5VZI3 342 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 Q6ZTC4 211 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 NRACQ8N912 160 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 CSNK1G2-AS1Q8NCQ2 148 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 AP3S1Q92572 193 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 ACY3Q96HD9 319 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 RAB40CQ96S21 281 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 TMEM222Q9H0R3 208 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 MAGT1Q9H0U3 335 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 NAA60Q9H7X0 242 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 GEMIN7Q9H840 131 aaKnown RBP4.48□□□□□ -1.69
NUP88-212ENST00000576708 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.48□□□□□ -1.69
NUP88-212ENST00000576708 NDUFA13Q9P0J0 144 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 TBC1D24Q9ULP9 559 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
NUP88-212ENST00000576708 DNAH2Q9P225 4427 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 HECTD4Q9Y4D8 3996 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
NUP88-212ENST00000576708 AGRNO00468 2067 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 TRAV30A0A087WSZ9 112 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 FAM240BA0A1B0GVZ2 78 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 RPS10-NUDT3A0A1W2PQS6 291 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 CRYM-AS1A6NIL9 109 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 CEBPZOSA8MTT3 80 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 ZNF705EA8MWA4 302 aaPredicted RBP4.47□□□□□ -1.69
NUP88-212ENST00000576708 FAM90A26D6RGX4 464 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 RGS5O15539 181 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 IGKV3-20P01619 116 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 IL4P05112 153 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 SPP1P10451 314 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 TBPP20226 339 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 FXYD7P58549 80 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 UBE2G2P60604 165 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 C12orf74Q32Q52 190 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 C2orf83Q53S99 150 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 MORN3Q6PF18 240 aaPredicted RBP4.47□□□□□ -1.69
NUP88-212ENST00000576708 LINC00518Q8N0U6 118 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 OR51G1Q8NGK1 321 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 OR4C16Q8NGL9 310 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 OR1S2Q8NGQ3 325 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 OR52E5Q8NH55 327 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 DTD1Q8TEA8 209 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 Q8WTZ3 238 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 RBPMSQ93062 196 aaKnown RBP4.47□□□□□ -1.69
NUP88-212ENST00000576708 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 XCL2Q9UBD3 114 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 RPH3ALQ9UNE2 315 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 GPR132Q9UNW8 380 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 C14orf166Q9Y224 244 aaKnown RBP4.47□□□□□ -1.69
NUP88-212ENST00000576708 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
NUP88-212ENST00000576708 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 TRAV10A0A0B4J240 114 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 RAB19A4D1S5 217 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 DISC1C4P0D8 188 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 H3BMM0 161 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 TOMM40O96008 361 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 RD3LP0DJH9 198 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 PSG1P11464 419 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 SLC25A4P12235 298 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 MIFP14174 115 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 NPY1RP25929 384 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 YPEL3P61236 119 aaPredicted RBP4.46□□□□□ -1.7
NUP88-212ENST00000576708 RAB11AP62491 216 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 GDF5OSQ5U4N7 250 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
NUP88-212ENST00000576708 LYZL2Q7Z4W2 148 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 FAM219AQ8IW50 185 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 OR51S1Q8NGJ8 323 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
NUP88-212ENST00000576708 SMIM4Q8WVI0 70 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 NARS2Q96I59 477 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms